Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC011352.1-201ENST00000512300 793 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 AC010342.1-201ENST00000514047 877 ntBASIC4.4□□□□□ -1.71
COPB1P53618 RNU6-150P-201ENST00000516237 95 ntBASIC4.4□□□□□ -1.71
COPB1P53618 MIR2116-201ENST00000517221 80 ntBASIC4.4□□□□□ -1.71
COPB1P53618 MTND4LP26-201ENST00000518144 282 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.4□□□□□ -1.71
COPB1P53618 AC016957.1-201ENST00000534895 309 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.4□□□□□ -1.71
COPB1P53618 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.4□□□□□ -1.71
COPB1P53618 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 MIR4637-201ENST00000582405 84 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.4□□□□□ -1.71
COPB1P53618 AC138749.5-201ENST00000611461 208 ntBASIC4.4□□□□□ -1.71
COPB1P53618 MIR486-1-201ENST00000612171 68 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC078899.5-201ENST00000612475 178 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.4□□□□□ -1.71
COPB1P53618 AC027807.2-201ENST00000616099 408 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC116165.2-201ENST00000616705 206 ntBASIC4.4□□□□□ -1.71
COPB1P53618 RMST_9.1-201ENST00000619945 193 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC068831.8-201ENST00000620171 435 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC095031.1-201ENST00000623685 672 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AL160394.1-201ENST00000624765 724 ntBASIC4.4□□□□□ -1.71
COPB1P53618 AC068724.3-201ENST00000625906 87 ntBASIC4.4□□□□□ -1.71
COPB1P53618 XPOTP1-201ENST00000443317 2398 ntBASIC4.4□□□□□ -1.71
COPB1P53618 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COPB1P53618 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COPB1P53618 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COPB1P53618 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
COPB1P53618 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COPB1P53618 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COPB1P53618 Y_RNA.126-201ENST00000363382 111 ntBASIC4.39□□□□□ -1.71
COPB1P53618 RNA5SP322-201ENST00000363617 119 ntBASIC4.39□□□□□ -1.71
COPB1P53618 RNA5SP509-201ENST00000364577 119 ntBASIC4.39□□□□□ -1.71
COPB1P53618 RNA5SP366-201ENST00000365454 123 ntBASIC4.39□□□□□ -1.71
COPB1P53618 DSTNP4-201ENST00000399472 474 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.39□□□□□ -1.71
COPB1P53618 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.39□□□□□ -1.71
COPB1P53618 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.39□□□□□ -1.71
COPB1P53618 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COPB1P53618 NPM1P34-201ENST00000428821 893 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.39□□□□□ -1.71
COPB1P53618 AC239367.2-201ENST00000447309 705 ntBASIC4.39□□□□□ -1.71
COPB1P53618 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COPB1P53618 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.39□□□□□ -1.71
COPB1P53618 FABP3P2-201ENST00000453169 399 ntBASIC4.39□□□□□ -1.71
COPB1P53618 MTCO3P2-201ENST00000457365 171 ntBASIC4.39□□□□□ -1.71
COPB1P53618 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.39□□□□□ -1.71
COPB1P53618 SNORD42A-201ENST00000459584 64 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.39□□□□□ -1.71
COPB1P53618 AC114981.1-201ENST00000503897 678 ntBASIC4.39□□□□□ -1.71
COPB1P53618 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.39□□□□□ -1.71
COPB1P53618 BTF3L4P4-201ENST00000506381 449 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AC093809.1-201ENST00000509155 340 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.39□□□□□ -1.71
COPB1P53618 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COPB1P53618 AC025881.1-201ENST00000518851 512 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AP002748.2-201ENST00000528671 348 ntBASIC4.39□□□□□ -1.71
COPB1P53618 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.39□□□□□ -1.71
COPB1P53618 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.39□□□□□ -1.71
COPB1P53618 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
COPB1P53618 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.39□□□□□ -1.71
COPB1P53618 AC009063.1-201ENST00000563342 702 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.39□□□□□ -1.71
COPB1P53618 HSPE1P14-201ENST00000605812 302 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AL591424.2-201ENST00000617023 128 ntBASIC4.39□□□□□ -1.71
COPB1P53618 AP000843.1-201ENST00000624880 701 ntBASIC4.39□□□□□ -1.71
COPB1P53618 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.39□□□□□ -1.71
COPB1P53618 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COPB1P53618 Z73965.1-201ENST00000623412 2297 ntBASIC4.39□□□□□ -1.71
COPB1P53618 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.39□□□□□ -1.71
COPB1P53618 AP000756.2-201ENST00000624168 2567 ntBASIC4.39□□□□□ -1.71
COPB1P53618 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COPB1P53618 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
COPB1P53618 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.38□□□□□ -1.71
COPB1P53618 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.38□□□□□ -1.71
COPB1P53618 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.38□□□□□ -1.71
COPB1P53618 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COPB1P53618 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COPB1P53618 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
COPB1P53618 AL451142.2-201ENST00000429076 2090 ntBASIC4.38□□□□□ -1.71
COPB1P53618 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.38□□□□□ -1.71
COPB1P53618 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
COPB1P53618 SNORA60-201ENST00000362396 134 ntBASIC4.38□□□□□ -1.71
COPB1P53618 RNU5F-7P-201ENST00000363696 115 ntBASIC4.38□□□□□ -1.71
COPB1P53618 RNU6-777P-201ENST00000364265 104 ntBASIC4.38□□□□□ -1.71
COPB1P53618 RNA5SP479-201ENST00000364858 117 ntBASIC4.38□□□□□ -1.71
COPB1P53618 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COPB1P53618 RNU6-297P-201ENST00000384636 107 ntBASIC4.38□□□□□ -1.71
COPB1P53618 MIR649-201ENST00000384843 97 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC025750.1-201ENST00000399891 379 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AL121972.1-201ENST00000402023 252 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.38□□□□□ -1.71
COPB1P53618 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.38□□□□□ -1.71
COPB1P53618 AC109780.2-201ENST00000413467 845 ntBASIC4.38□□□□□ -1.71
COPB1P53618 MTCYBP5-201ENST00000423752 1135 ntBASIC4.38□□□□□ -1.71
COPB1P53618 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.38□□□□□ -1.71
COPB1P53618 RPL36P19-201ENST00000430744 301 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms