Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-225P-201ENST00000384613 103 ntBASIC5.66□□□□□ -1.5
USP11P51784 AC013442.1-201ENST00000397347 228 ntBASIC5.66□□□□□ -1.5
USP11P51784 AL359634.1-202ENST00000404721 284 ntBASIC5.66□□□□□ -1.5
USP11P51784 AC006548.1-201ENST00000427470 102 ntBASIC5.66□□□□□ -1.5
USP11P51784 MTCYBP9-201ENST00000431021 303 ntBASIC5.66□□□□□ -1.5
USP11P51784 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.66□□□□□ -1.5
USP11P51784 AC119618.1-201ENST00000434191 222 ntBASIC5.66□□□□□ -1.5
USP11P51784 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.66□□□□□ -1.5
USP11P51784 AL049734.2-201ENST00000441066 616 ntBASIC5.66□□□□□ -1.5
USP11P51784 RPL7L1P1-201ENST00000448259 785 ntBASIC5.66□□□□□ -1.5
USP11P51784 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.66□□□□□ -1.5
USP11P51784 AC073073.1-201ENST00000493920 463 ntBASIC5.66□□□□□ -1.5
USP11P51784 MRPS33P2-201ENST00000507850 322 ntBASIC5.66□□□□□ -1.5
USP11P51784 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.66□□□□□ -1.5
USP11P51784 FAM206BP-201ENST00000510179 541 ntBASIC5.66□□□□□ -1.5
USP11P51784 AP003122.3-201ENST00000526316 255 ntBASIC5.66□□□□□ -1.5
USP11P51784 EIF4A2P5-201ENST00000529914 499 ntBASIC5.66□□□□□ -1.5
USP11P51784 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.66□□□□□ -1.5
USP11P51784 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.66□□□□□ -1.5
USP11P51784 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.66□□□□□ -1.5
USP11P51784 SNRPGP18-201ENST00000553000 214 ntBASIC5.66□□□□□ -1.5
USP11P51784 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.66□□□□□ -1.5
USP11P51784 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.66□□□□□ -1.5
USP11P51784 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.66□□□□□ -1.5
USP11P51784 AC007938.3-201ENST00000604965 623 ntBASIC5.66□□□□□ -1.5
USP11P51784 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.66□□□□□ -1.5
USP11P51784 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.66□□□□□ -1.5
USP11P51784 AC090510.2-201ENST00000617465 629 ntBASIC5.66□□□□□ -1.5
USP11P51784 CR381572.1-201ENST00000625098 102 ntBASIC5.66□□□□□ -1.5
USP11P51784 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.66□□□□□ -1.5
USP11P51784 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
USP11P51784 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.65□□□□□ -1.5
USP11P51784 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
USP11P51784 AC027228.2-201ENST00000567141 2154 ntBASIC5.65□□□□□ -1.5
USP11P51784 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
USP11P51784 RNU6-853P-201ENST00000364306 107 ntBASIC5.65□□□□□ -1.5
USP11P51784 RNY4P16-201ENST00000364768 94 ntBASIC5.65□□□□□ -1.5
USP11P51784 RNU6-606P-201ENST00000384721 111 ntBASIC5.65□□□□□ -1.5
USP11P51784 RNU6-1106P-201ENST00000390845 107 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL645733.1-201ENST00000402250 217 ntBASIC5.65□□□□□ -1.5
USP11P51784 AF186996.5-201ENST00000418098 904 ntBASIC5.65□□□□□ -1.5
USP11P51784 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.65□□□□□ -1.5
USP11P51784 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.65□□□□□ -1.5
USP11P51784 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.65□□□□□ -1.5
USP11P51784 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.65□□□□□ -1.5
USP11P51784 PRPF38AP2-201ENST00000438179 851 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL138799.3-201ENST00000438968 350 ntBASIC5.65□□□□□ -1.5
USP11P51784 CBX1P4-201ENST00000439415 457 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL137792.2-201ENST00000443484 235 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL035551.1-201ENST00000446931 348 ntBASIC5.65□□□□□ -1.5
USP11P51784 AC002553.2-201ENST00000453217 340 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL691482.1-201ENST00000453255 87 ntBASIC5.65□□□□□ -1.5
USP11P51784 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.65□□□□□ -1.5
USP11P51784 AC091685.2-201ENST00000454924 864 ntBASIC5.65□□□□□ -1.5
USP11P51784 RPS20P32-201ENST00000456044 356 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.65□□□□□ -1.5
USP11P51784 NDUFB5P1-201ENST00000508134 564 ntBASIC5.65□□□□□ -1.5
USP11P51784 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.65□□□□□ -1.5
USP11P51784 AC093303.1-201ENST00000514549 295 ntBASIC5.65□□□□□ -1.5
USP11P51784 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.65□□□□□ -1.5
USP11P51784 APOOP3-201ENST00000536787 586 ntBASIC5.65□□□□□ -1.5
USP11P51784 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.65□□□□□ -1.5
USP11P51784 AL358913.1-201ENST00000554342 121 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.65□□□□□ -1.5
USP11P51784 AL356432.3-201ENST00000568952 465 ntBASIC5.65□□□□□ -1.5
USP11P51784 MIR4675-201ENST00000577898 77 ntBASIC5.65□□□□□ -1.5
USP11P51784 AP001029.3-201ENST00000588063 596 ntBASIC5.65□□□□□ -1.5
USP11P51784 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.65□□□□□ -1.5
USP11P51784 BBIP1P1-201ENST00000602999 279 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL022345.1-201ENST00000607292 135 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL049794.2-201ENST00000616301 365 ntBASIC5.65□□□□□ -1.5
USP11P51784 AC244517.12-201ENST00000623581 663 ntBASIC5.65□□□□□ -1.5
USP11P51784 AL353662.3-201ENST00000625131 237 ntBASIC5.65□□□□□ -1.5
USP11P51784 CDRT1-208ENST00000630868 794 ntBASIC5.65□□□□□ -1.5
USP11P51784 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
USP11P51784 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
USP11P51784 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
USP11P51784 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
USP11P51784 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
USP11P51784 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
USP11P51784 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
USP11P51784 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP11P51784 AC104623.2-202ENST00000623477 4002 ntBASIC5.64□□□□□ -1.51
USP11P51784 CASC19-204ENST00000641001 2055 ntBASIC5.64□□□□□ -1.51
USP11P51784 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
USP11P51784 OR1S2-201ENST00000302592 978 ntBASIC5.64□□□□□ -1.51
USP11P51784 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
USP11P51784 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
USP11P51784 ARF4P3-201ENST00000397387 509 ntBASIC5.64□□□□□ -1.51
USP11P51784 MIR548F4-201ENST00000408515 105 ntBASIC5.64□□□□□ -1.51
USP11P51784 RN7SKP125-201ENST00000410481 302 ntBASIC5.64□□□□□ -1.51
USP11P51784 AC007738.1-201ENST00000413892 348 ntBASIC5.64□□□□□ -1.51
USP11P51784 PRELID3BP11-201ENST00000414230 479 ntBASIC5.64□□□□□ -1.51
USP11P51784 AC114482.1-201ENST00000418010 247 ntBASIC5.64□□□□□ -1.51
USP11P51784 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms