Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 MIR6862-1-201ENST00000613016 70 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AL133173.2-201ENST00000614270 90 ntBASIC3.92□□□□□ -1.78
SOX2P48431 MIR6862-2-201ENST00000614755 70 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC009268.2-201ENST00000621925 457 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC007546.2-201ENST00000623996 360 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC067931.1-201ENST00000624190 671 ntBASIC3.92□□□□□ -1.78
SOX2P48431 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 RARSP1-201ENST00000542842 1418 ntBASIC3.92□□□□□ -1.78
SOX2P48431 AC004520.1-201ENST00000608362 1413 ntBASIC3.92□□□□□ -1.78
SOX2P48431 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 C4BPAP1-201ENST00000415474 1893 ntBASIC3.92□□□□□ -1.78
SOX2P48431 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.92□□□□□ -1.78
SOX2P48431 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.92□□□□□ -1.78
SOX2P48431 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
SOX2P48431 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SOX2P48431 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SOX2P48431 EIF2AP4-201ENST00000424793 1781 ntBASIC3.91□□□□□ -1.78
SOX2P48431 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SOX2P48431 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 INTS6P1-201ENST00000504674 2530 ntBASIC3.91□□□□□ -1.78
SOX2P48431 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 AC011460.1-201ENST00000636268 1834 ntBASIC3.91□□□□□ -1.78
SOX2P48431 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SOX2P48431 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 RNA5SP305-201ENST00000362665 119 ntBASIC3.91□□□□□ -1.78
SOX2P48431 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SOX2P48431 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SOX2P48431 SNORD115-47-201ENST00000391226 86 ntBASIC3.91□□□□□ -1.78
SOX2P48431 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 CIR1P3-201ENST00000405137 479 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL590002.1-201ENST00000406554 418 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL603766.1-201ENST00000407763 664 ntBASIC3.91□□□□□ -1.78
SOX2P48431 Y_RNA.604-201ENST00000410574 102 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 AC073464.1-201ENST00000429823 534 ntBASIC3.91□□□□□ -1.78
SOX2P48431 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL049734.2-201ENST00000441066 616 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.91□□□□□ -1.78
SOX2P48431 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 TPT1P13-201ENST00000449760 499 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC013267.1-201ENST00000458227 267 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC018638.3-201ENST00000461273 132 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL121769.1-201ENST00000469473 401 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 AC114967.1-201ENST00000504890 259 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 AC007016.1-201ENST00000512110 244 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC010342.1-201ENST00000514047 877 ntBASIC3.91□□□□□ -1.78
SOX2P48431 RNU6-27P-201ENST00000516146 107 ntBASIC3.91□□□□□ -1.78
SOX2P48431 RN7SKP276-201ENST00000516242 268 ntBASIC3.91□□□□□ -1.78
SOX2P48431 Vault.3-201ENST00000516676 95 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 AP001893.2-201ENST00000526949 202 ntBASIC3.91□□□□□ -1.78
SOX2P48431 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 AL110118.1-201ENST00000553543 400 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL845331.3-202ENST00000562856 261 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL356432.3-201ENST00000568952 465 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.91□□□□□ -1.78
SOX2P48431 BPIFA4P-203ENST00000603168 689 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC087763.1-201ENST00000603391 286 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL365503.1-201ENST00000605247 905 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AP002360.4-201ENST00000606980 481 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC092954.2-201ENST00000609103 430 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL590282.1-201ENST00000610379 1136 ntBASIC3.91□□□□□ -1.78
SOX2P48431 MLECP1-201ENST00000615893 709 ntBASIC3.91□□□□□ -1.78
SOX2P48431 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SOX2P48431 AL356321.1-201ENST00000621360 228 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AL359880.1-201ENST00000621879 266 ntBASIC3.91□□□□□ -1.78
SOX2P48431 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.91□□□□□ -1.78
SOX2P48431 AC091925.2-201ENST00000625059 256 ntBASIC3.91□□□□□ -1.78
SOX2P48431 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SOX2P48431 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.91□□□□□ -1.78
SOX2P48431 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SOX2P48431 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SOX2P48431 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SOX2P48431 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms