Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RPL31P1-201ENST00000398116 372 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 UBE2V1P15-201ENST00000407776 448 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF9P41273 RPL21P40-201ENST00000428586 483 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 AC114973.1-201ENST00000429057 632 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 USP9YP31-201ENST00000431405 881 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 SETP5-201ENST00000437270 562 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 MTCO3P43-201ENST00000440974 771 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF9P41273 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF9P41273 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF9P41273 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF9P41273 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF9P41273 AC026616.1-201ENST00000523157 525 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 AP001207.1-201ENST00000524051 481 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 AC079600.2-201ENST00000550076 130 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFSF9P41273 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 AC010735.1-201ENST00000567305 1026 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 BNIP3P4-201ENST00000604946 565 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 KATNBL1P5-201ENST00000605015 517 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 AC003001.2-201ENST00000616294 831 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 XIST_intron.1-201ENST00000619444 68 ntBASIC3.11□□□□□ -1.91
TNFSF9P41273 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF9P41273 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
TNFSF9P41273 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFSF9P41273 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF9P41273 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF9P41273 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF9P41273 AC096644.4-201ENST00000563417 2912 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 ZNF734P-201ENST00000419494 1534 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
TNFSF9P41273 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF9P41273 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF9P41273 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TNFSF9P41273 RNU6-851P-201ENST00000384565 107 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AL583834.1-201ENST00000406943 343 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 RPS3AP9-201ENST00000417027 792 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 USP9YP36-201ENST00000424581 829 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 VN1R42P-201ENST00000424651 344 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFSF9P41273 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFSF9P41273 HMGB3P8-201ENST00000449709 577 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
TNFSF9P41273 AC111000.2-201ENST00000507775 550 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC091826.1-201ENST00000514065 313 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC104057.1-201ENST00000515547 497 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 RN7SKP132-201ENST00000516001 208 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 HIGD1AP6-201ENST00000521833 279 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFSF9P41273 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFSF9P41273 FAM60DP-201ENST00000524174 632 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.1□□□□□ -1.91
TNFSF9P41273 OSBPL9P3-201ENST00000534523 595 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC004217.3-201ENST00000551552 878 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFSF9P41273 AC034105.3-201ENST00000565294 442 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC095057.3-201ENST00000567102 1157 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.1□□□□□ -1.91
TNFSF9P41273 AC024153.1-201ENST00000603103 365 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC025588.3-201ENST00000604182 274 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC092184.1-201ENST00000625042 715 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC132825.7-201ENST00000638744 335 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
TNFSF9P41273 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TNFSF9P41273 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFSF9P41273 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.1□□□□□ -1.91
TNFSF9P41273 RNU1-35P-201ENST00000362782 153 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 RNVU1-3-201ENST00000364313 161 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 RNU6-650P-201ENST00000365658 111 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 RNU6-837P-201ENST00000391056 108 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.09□□□□□ -1.91
TNFSF9P41273 RPL23AP47-201ENST00000408017 460 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.09□□□□□ -1.91
TNFSF9P41273 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AC005002.1-201ENST00000447458 540 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 RPL7P52-201ENST00000449200 742 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 HMGB1P15-201ENST00000453854 435 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AC092754.2-201ENST00000463506 460 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 RPL21P104-201ENST00000464143 478 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AP001025.2-201ENST00000490908 477 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AC010468.3-201ENST00000508225 458 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.09□□□□□ -1.91
TNFSF9P41273 MTCO2P32-201ENST00000514865 403 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.09□□□□□ -1.91
TNFSF9P41273 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms