Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCNFP41002 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.21□□□□□ -1.58
CCNFP41002 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCNFP41002 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.21□□□□□ -1.58
CCNFP41002 AL512782.1-201ENST00000603093 364 ntBASIC5.21□□□□□ -1.58
CCNFP41002 AL355812.1-201ENST00000603215 216 ntBASIC5.21□□□□□ -1.58
CCNFP41002 AC004908.2-201ENST00000609090 574 ntBASIC5.21□□□□□ -1.58
CCNFP41002 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.21□□□□□ -1.58
CCNFP41002 AL365204.3-201ENST00000612448 685 ntBASIC5.21□□□□□ -1.58
CCNFP41002 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.21□□□□□ -1.58
CCNFP41002 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.21□□□□□ -1.58
CCNFP41002 AC019278.1-201ENST00000623516 479 ntBASIC5.21□□□□□ -1.58
CCNFP41002 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCNFP41002 AC093535.2-201ENST00000624769 2326 ntBASIC5.21□□□□□ -1.58
CCNFP41002 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCNFP41002 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.21□□□□□ -1.58
CCNFP41002 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCNFP41002 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CCNFP41002 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CCNFP41002 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCNFP41002 AC244517.1-201ENST00000606030 2086 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AP004289.2-201ENST00000444413 1457 ntBASIC5.2□□□□□ -1.58
CCNFP41002 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
CCNFP41002 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
CCNFP41002 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNFP41002 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CCNFP41002 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCNFP41002 Y_RNA.326-201ENST00000365176 113 ntBASIC5.2□□□□□ -1.58
CCNFP41002 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 AL583835.1-201ENST00000399570 407 ntBASIC5.2□□□□□ -1.58
CCNFP41002 OR4K12P-201ENST00000406538 961 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AL606923.1-201ENST00000406616 190 ntBASIC5.2□□□□□ -1.58
CCNFP41002 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 CYCSP10-201ENST00000417973 294 ntBASIC5.2□□□□□ -1.58
CCNFP41002 BTF3L4P3-201ENST00000418879 476 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AC093655.2-201ENST00000425735 631 ntBASIC5.2□□□□□ -1.58
CCNFP41002 HMGB1P18-201ENST00000438801 619 ntBASIC5.2□□□□□ -1.58
CCNFP41002 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.2□□□□□ -1.58
CCNFP41002 PTMAP3-201ENST00000447474 330 ntBASIC5.2□□□□□ -1.58
CCNFP41002 MTND1P18-201ENST00000448191 573 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AL591623.2-201ENST00000449978 222 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AL513533.1-201ENST00000453728 415 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AL590639.1-201ENST00000456484 337 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNFP41002 Y_RNA.632-201ENST00000459189 102 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AC053481.1-201ENST00000467217 306 ntBASIC5.2□□□□□ -1.58
CCNFP41002 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 ATP5LP3-201ENST00000514223 304 ntBASIC5.2□□□□□ -1.58
CCNFP41002 RNU6-27P-201ENST00000516146 107 ntBASIC5.2□□□□□ -1.58
CCNFP41002 RNA5SP464-201ENST00000516251 108 ntBASIC5.2□□□□□ -1.58
CCNFP41002 SNORD27.1-201ENST00000516319 72 ntBASIC5.2□□□□□ -1.58
CCNFP41002 RNU7-51P-201ENST00000516560 62 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNFP41002 AC105031.1-201ENST00000518550 476 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNFP41002 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNFP41002 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 AC126177.5-201ENST00000549599 178 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AL049779.2-201ENST00000553847 315 ntBASIC5.2□□□□□ -1.58
CCNFP41002 NCAPGP2-201ENST00000557911 754 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AC007225.2-201ENST00000562529 256 ntBASIC5.2□□□□□ -1.58
CCNFP41002 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 BNIP3P22-201ENST00000593399 556 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AC104687.2-201ENST00000604442 342 ntBASIC5.2□□□□□ -1.58
CCNFP41002 RNU6-89P-201ENST00000606519 100 ntBASIC5.2□□□□□ -1.58
CCNFP41002 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNFP41002 AC037198.3-201ENST00000616754 526 ntBASIC5.2□□□□□ -1.58
CCNFP41002 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 AL603758.1-201ENST00000618654 241 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AC118658.2-201ENST00000618697 459 ntBASIC5.2□□□□□ -1.58
CCNFP41002 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.2□□□□□ -1.58
CCNFP41002 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.2□□□□□ -1.58
CCNFP41002 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNFP41002 AC099494.2-201ENST00000623371 978 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AL136313.1-201ENST00000624804 202 ntBASIC5.2□□□□□ -1.58
CCNFP41002 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CCNFP41002 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNFP41002 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CCNFP41002 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.2□□□□□ -1.58
CCNFP41002 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCNFP41002 AL138713.1-201ENST00000624026 2130 ntBASIC5.2□□□□□ -1.58
CCNFP41002 AL450345.1-202ENST00000605741 3881 ntBASIC5.2□□□□□ -1.58
CCNFP41002 ZNF33CP-201ENST00000432492 2030 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CCNFP41002 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNFP41002 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms