Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD13P35453 RPS4XP13-201ENST00000483219 789 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXD13P35453 AC023424.2-201ENST00000493479 777 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC093278.1-201ENST00000494700 600 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC091951.3-201ENST00000504093 246 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD13P35453 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD13P35453 RNU6-1095P-201ENST00000516148 108 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 RN7SKP244-201ENST00000516513 307 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXD13P35453 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD13P35453 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
HOXD13P35453 AL121576.1-201ENST00000556055 276 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC009101.1-201ENST00000568135 242 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC099489.2-201ENST00000574976 260 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD13P35453 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.02□□□□□ -1.77
HOXD13P35453 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD13P35453 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD13P35453 KLKP1-201ENST00000595979 403 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC234772.3-201ENST00000602277 528 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC022022.2-201ENST00000602989 360 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AL031176.1-201ENST00000604554 466 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC034229.4-201ENST00000607861 441 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD13P35453 TUSC7.1-201ENST00000610969 165 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXD13P35453 AP000553.6-201ENST00000641242 118 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXD13P35453 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HOXD13P35453 DDX43P2-201ENST00000604753 1354 ntBASIC4.02□□□□□ -1.77
HOXD13P35453 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HOXD13P35453 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD13P35453 RNU6-50P-201ENST00000362356 103 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 Y_RNA.126-201ENST00000363382 111 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 RNU6-1074P-201ENST00000383995 104 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 AL391417.1-201ENST00000404100 426 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 AL356131.1-201ENST00000405826 414 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 RN7SKP56-201ENST00000410513 331 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 RN7SKP159-201ENST00000410657 292 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 CYCSP19-201ENST00000411715 316 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD13P35453 HIGD1AP15-201ENST00000416198 280 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 PTP4A1P5-201ENST00000420305 455 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 AC007742.1-201ENST00000425789 329 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 HMGB3P5-201ENST00000428894 612 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD13P35453 ELOCP26-201ENST00000436067 329 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD13P35453 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HOXD13P35453 RPL7P52-201ENST00000449200 742 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 RNU7-136P-201ENST00000458819 69 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD13P35453 RN7SL132P-201ENST00000478131 296 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.01□□□□□ -1.77
HOXD13P35453 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD13P35453 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
HOXD13P35453 MLLT10P2-201ENST00000506434 249 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 AC093281.2-201ENST00000510153 597 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 RNA5SP216-201ENST00000516111 123 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 RNU6-150P-201ENST00000516237 95 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD13P35453 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD13P35453 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.01□□□□□ -1.77
HOXD13P35453 GTF2IP22-201ENST00000554443 182 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 CYCSP2-201ENST00000558168 301 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 AC087481.2-201ENST00000565492 330 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXD13P35453 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD13P35453 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD13P35453 AL163642.2-201ENST00000604722 1019 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 AC090425.2-201ENST00000608818 501 ntBASIC4.01□□□□□ -1.77
HOXD13P35453 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.01□□□□□ -1.77
HOXD13P35453 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD13P35453 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD13P35453 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD13P35453 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXD13P35453 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HOXD13P35453 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HOXD13P35453 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4□□□□□ -1.77
HOXD13P35453 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HOXD13P35453 RNU6-157P-201ENST00000383957 107 ntBASIC4□□□□□ -1.77
HOXD13P35453 RNU6-83P-201ENST00000384568 112 ntBASIC4□□□□□ -1.77
HOXD13P35453 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4□□□□□ -1.77
HOXD13P35453 RPL36AP36-201ENST00000418616 301 ntBASIC4□□□□□ -1.77
HOXD13P35453 MTCO2P17-201ENST00000424336 677 ntBASIC4□□□□□ -1.77
HOXD13P35453 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4□□□□□ -1.77
HOXD13P35453 MTCO2P20-201ENST00000437339 673 ntBASIC4□□□□□ -1.77
HOXD13P35453 CYCSP43-201ENST00000438233 310 ntBASIC4□□□□□ -1.77
HOXD13P35453 MTCYBP31-201ENST00000438855 1122 ntBASIC4□□□□□ -1.77
HOXD13P35453 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4□□□□□ -1.77
HOXD13P35453 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4□□□□□ -1.77
HOXD13P35453 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4□□□□□ -1.77
HOXD13P35453 DNAJC19P1-201ENST00000455312 319 ntBASIC4□□□□□ -1.77
HOXD13P35453 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms