Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC8P31273 MIR3912-201ENST00000577566 105 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC8P31273 ZNF415P1-201ENST00000582279 1166 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 AL669831.4-202ENST00000590817 238 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 Z94722.1-201ENST00000604328 474 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 AL133507.1-201ENST00000605269 557 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC8P31273 AC073968.1-201ENST00000618594 637 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 AC131159.1-201ENST00000621854 213 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 MAPK10-253ENST00000641010 4072 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 AC068254.2-201ENST00000623938 3577 ntBASIC3.98□□□□□ -1.77
HOXC8P31273 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC8P31273 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC8P31273 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC8P31273 OR5H2-201ENST00000355273 945 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXC8P31273 RNU6-525P-201ENST00000363685 104 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 SUGT1P1-201ENST00000379514 476 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 SNORD116-8-201ENST00000384365 95 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 SNORD65.1-201ENST00000390889 71 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 RPL31P1-201ENST00000398116 372 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AL024474.1-201ENST00000404655 591 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 RN7SKP111-201ENST00000410349 271 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC8P31273 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC8P31273 AC005326.1-201ENST00000429197 123 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC087650.1-201ENST00000431445 468 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC8P31273 AC005019.1-201ENST00000436455 431 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 COX7BP2-201ENST00000437976 242 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AL138799.3-201ENST00000438968 350 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC8P31273 AC007327.1-201ENST00000447461 264 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC079776.3-201ENST00000450665 370 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 ATG12P2-201ENST00000456830 416 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC8P31273 AC010469.1-201ENST00000463864 576 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC8P31273 TMED11P-201ENST00000479478 690 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC8P31273 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 MTCYBP37-201ENST00000510642 1133 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 MTCO3P44-201ENST00000510977 541 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC010486.3-201ENST00000511602 785 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 FABP5P12-201ENST00000515543 389 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 RNU5A-4P-201ENST00000516588 111 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC8P31273 AC027309.2-201ENST00000520566 192 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC8P31273 AP000926.4-201ENST00000527351 454 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC8P31273 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC8P31273 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 AC090502.2-201ENST00000549267 280 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC8P31273 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC8P31273 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC8P31273 GTF2IP8-201ENST00000560687 584 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AL354943.1-201ENST00000572103 781 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 MIR4644-201ENST00000579929 84 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC8P31273 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 SNRPGP15-201ENST00000600149 222 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC8P31273 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 AP003399.1-201ENST00000637534 361 ntBASIC3.97□□□□□ -1.77
HOXC8P31273 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
HOXC8P31273 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC8P31273 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXC8P31273 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC8P31273 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HOXC8P31273 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
HOXC8P31273 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC8P31273 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC8P31273 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
HOXC8P31273 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HOXC8P31273 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HOXC8P31273 FAM133CP-201ENST00000332869 704 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 RNU6-263P-201ENST00000363811 107 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 RNU6-1181P-201ENST00000384191 106 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 SNORD17-201ENST00000390930 237 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 MTND4LP20-201ENST00000402379 270 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 RPL23AP47-201ENST00000408017 460 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 RNA5SP56-201ENST00000410277 118 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 RNA5SP104-201ENST00000410989 118 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC8P31273 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC8P31273 AC009518.2-201ENST00000418056 731 ntBASIC3.96□□□□□ -1.78
HOXC8P31273 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms