Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC022431.1-201ENST00000450941 438 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 RPL23AP14-201ENST00000468281 468 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 FAM92A1P2-202ENST00000504766 877 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.73□□□□□ -1.97
COL4A5P29400 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.73□□□□□ -1.97
COL4A5P29400 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.73□□□□□ -1.97
COL4A5P29400 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.73□□□□□ -1.97
COL4A5P29400 AC131238.1-201ENST00000617135 328 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 AL133370.2-201ENST00000619934 439 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 MIR6766-201ENST00000622641 72 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 AL160394.1-201ENST00000624765 724 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A5P29400 AC010733.2-201ENST00000589496 5702 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 BX005019.1-201ENST00000561881 1810 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A5P29400 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A5P29400 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.73□□□□□ -1.97
COL4A5P29400 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL4A5P29400 AL357520.1-201ENST00000441557 453 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.73□□□□□ -1.97
COL4A5P29400 RPL23AP70-201ENST00000483361 460 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.73□□□□□ -1.97
COL4A5P29400 AK6P1-201ENST00000540219 478 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 MIR4781-201ENST00000585250 76 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.73□□□□□ -1.97
COL4A5P29400 AC116447.1-201ENST00000613153 453 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.73□□□□□ -1.97
COL4A5P29400 AP006248.2-201ENST00000623309 592 ntBASIC2.73□□□□□ -1.97
COL4A5P29400 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.72□□□□□ -1.97
COL4A5P29400 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 OR10AB1P-202ENST00000641219 1686 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL4A5P29400 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL4A5P29400 MIR365B-201ENST00000362317 111 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 RNU4-7P-201ENST00000364758 141 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
COL4A5P29400 AC048351.1-201ENST00000420064 602 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 AC022022.1-201ENST00000430304 178 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 CACYBPP1-201ENST00000438592 684 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 CLIC4P1-201ENST00000453177 535 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 MTCYBP14-201ENST00000457471 715 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.72□□□□□ -1.97
COL4A5P29400 AC108729.3-201ENST00000513484 108 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 AC068339.2-201ENST00000534395 618 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 AC091515.1-201ENST00000548110 679 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.72□□□□□ -1.97
COL4A5P29400 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.72□□□□□ -1.97
COL4A5P29400 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.72□□□□□ -1.97
COL4A5P29400 MTCYBP28-201ENST00000566728 1132 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 MIR3186-201ENST00000577404 85 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.72□□□□□ -1.97
COL4A5P29400 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.72□□□□□ -1.97
COL4A5P29400 AP004247.3-201ENST00000608682 624 ntBASIC2.72□□□□□ -1.97
COL4A5P29400 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
COL4A5P29400 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
COL4A5P29400 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL4A5P29400 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.71□□□□□ -1.98
COL4A5P29400 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
COL4A5P29400 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL4A5P29400 RNU6-146P-201ENST00000384602 108 ntBASIC2.71□□□□□ -1.98
COL4A5P29400 RNU6-14P-201ENST00000384630 106 ntBASIC2.71□□□□□ -1.98
COL4A5P29400 RPL21P18-201ENST00000469899 480 ntBASIC2.71□□□□□ -1.98
COL4A5P29400 RPL9P33-201ENST00000484311 566 ntBASIC2.71□□□□□ -1.98
COL4A5P29400 RNA5SP76-201ENST00000516277 87 ntBASIC2.71□□□□□ -1.98
COL4A5P29400 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.71□□□□□ -1.98
COL4A5P29400 AL845331.3-202ENST00000562856 261 ntBASIC2.71□□□□□ -1.98
COL4A5P29400 AP001521.1-201ENST00000609150 300 ntBASIC2.71□□□□□ -1.98
COL4A5P29400 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL4A5P29400 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
COL4A5P29400 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
COL4A5P29400 RNU1-87P-201ENST00000363727 170 ntBASIC2.7□□□□□ -1.98
COL4A5P29400 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
COL4A5P29400 AL139156.1-201ENST00000412785 841 ntBASIC2.7□□□□□ -1.98
COL4A5P29400 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.7□□□□□ -1.98
COL4A5P29400 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.7□□□□□ -1.98
COL4A5P29400 AL121882.1-201ENST00000422893 417 ntBASIC2.7□□□□□ -1.98
COL4A5P29400 AC245517.4-201ENST00000448601 281 ntBASIC2.7□□□□□ -1.98
COL4A5P29400 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.7□□□□□ -1.98
COL4A5P29400 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.7□□□□□ -1.98
COL4A5P29400 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
COL4A5P29400 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.7□□□□□ -1.98
COL4A5P29400 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.7□□□□□ -1.98
COL4A5P29400 AC078814.3-201ENST00000553036 491 ntBASIC2.7□□□□□ -1.98
COL4A5P29400 AC025281.1-201ENST00000567026 265 ntBASIC2.7□□□□□ -1.98
COL4A5P29400 AC103710.1-201ENST00000610003 901 ntBASIC2.7□□□□□ -1.98
COL4A5P29400 AC010378.1-201ENST00000619270 362 ntBASIC2.7□□□□□ -1.98
COL4A5P29400 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
COL4A5P29400 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.7□□□□□ -1.98
COL4A5P29400 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.7□□□□□ -1.98
COL4A5P29400 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL4A5P29400 MTND5P29-201ENST00000458676 1807 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms