Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 BNIP3P38-201ENST00000601117 544 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AL109653.1-201ENST00000603091 248 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC024220.1-201ENST00000603675 484 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC097504.2-201ENST00000608088 454 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC123767.1-202ENST00000620407 817 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 AC040168.1-201ENST00000623594 991 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC099654.8-201ENST00000637757 681 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
PTPN6P29350 AC118273.1-201ENST00000525324 3006 ntBASIC3.36□□□□□ -1.87
PTPN6P29350 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN6P29350 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPN6P29350 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN6P29350 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PTPN6P29350 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTPN6P29350 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PTPN6P29350 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PTPN6P29350 MIR23A-201ENST00000385245 73 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 ATP5A1P2-201ENST00000412323 255 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPN6P29350 OR4K6P-201ENST00000416478 897 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 SYF2P2-201ENST00000417620 583 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AL449283.1-202ENST00000418249 604 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AC099677.1-201ENST00000420575 175 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN6P29350 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPN6P29350 AP000907.1-201ENST00000428428 510 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 GTF2IP7-202ENST00000436677 309 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPN6P29350 USP9YP22-201ENST00000438971 294 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN6P29350 HMGB3P6-201ENST00000444896 598 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 RPS3AP46-201ENST00000448352 682 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPN6P29350 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPN6P29350 snoU13.22-201ENST00000459428 104 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AC092757.1-201ENST00000467293 467 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 RPL23AP44-201ENST00000482216 473 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPN6P29350 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN6P29350 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN6P29350 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN6P29350 RN7SKP157-201ENST00000516174 282 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 MIR2276-201ENST00000516886 89 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AC026403.1-201ENST00000518938 295 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 OR4P1P-201ENST00000530808 1136 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPN6P29350 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.35□□□□□ -1.87
PTPN6P29350 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPN6P29350 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.35□□□□□ -1.87
PTPN6P29350 AC010198.2-201ENST00000550612 259 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN6P29350 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.35□□□□□ -1.87
PTPN6P29350 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN6P29350 MIR3912-201ENST00000577566 105 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.35□□□□□ -1.87
PTPN6P29350 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.35□□□□□ -1.87
PTPN6P29350 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPN6P29350 AP001521.1-201ENST00000609150 300 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AL360181.4-201ENST00000621752 134 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 OR1S1-201ENST00000624470 978 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.35□□□□□ -1.87
PTPN6P29350 CYP3A51P-201ENST00000633513 256 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 AL034408.1-202ENST00000636088 415 ntBASIC3.35□□□□□ -1.87
PTPN6P29350 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPN6P29350 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN6P29350 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTPN6P29350 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTPN6P29350 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PTPN6P29350 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PTPN6P29350 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
PTPN6P29350 Y_RNA.25-201ENST00000362528 102 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 RPS3AP26-201ENST00000398259 784 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 RPL21P32-201ENST00000419877 477 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC007435.1-201ENST00000421086 415 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN6P29350 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN6P29350 SNRPEP4-201ENST00000435815 279 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN6P29350 VN1R10P-201ENST00000447106 875 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN6P29350 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PTPN6P29350 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN6P29350 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 OR4G11P-201ENST00000492842 939 ntBASIC3.34□□□□□ -1.87
PTPN6P29350 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN6P29350 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.34□□□□□ -1.87
PTPN6P29350 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPN6P29350 AC096571.1-202ENST00000506634 735 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms