Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 COX6CP18-201ENST00000448769 222 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR2AP24928 RPS3AP17-201ENST00000472594 777 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 POU5F1P7-201ENST00000508759 541 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 RNU6-1225P-201ENST00000516336 65 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.6□□□□□ -1.67
POLR2AP24928 AC008011.1-201ENST00000545989 227 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.6□□□□□ -1.67
POLR2AP24928 AL138976.2-201ENST00000563989 694 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC025627.2-201ENST00000576220 160 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR2AP24928 AC010680.3-201ENST00000604215 520 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC064801.1-201ENST00000612025 407 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC091834.1-201ENST00000614543 472 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 AC092650.2-201ENST00000619984 902 ntBASIC4.6□□□□□ -1.67
POLR2AP24928 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.6□□□□□ -1.67
POLR2AP24928 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.6□□□□□ -1.67
POLR2AP24928 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
POLR2AP24928 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
POLR2AP24928 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
POLR2AP24928 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
POLR2AP24928 AC006971.1-201ENST00000407916 4486 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
POLR2AP24928 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
POLR2AP24928 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
POLR2AP24928 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
POLR2AP24928 RNU6-216P-201ENST00000363282 104 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 RNY4P14-201ENST00000363656 96 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 Y_RNA.159-201ENST00000363674 87 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 MIR217-201ENST00000384817 110 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 MT-TD-201ENST00000387419 68 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
POLR2AP24928 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
POLR2AP24928 USP9YP27-201ENST00000418455 438 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 NPM1P34-201ENST00000428821 893 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 AL513175.1-201ENST00000431492 780 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.59□□□□□ -1.67
POLR2AP24928 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.59□□□□□ -1.67
POLR2AP24928 AC239798.3-201ENST00000454459 408 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 RPL18AP17-201ENST00000455326 198 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 MTCYBP18-201ENST00000501056 747 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.59□□□□□ -1.67
POLR2AP24928 AC009646.1-201ENST00000510455 318 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.59□□□□□ -1.67
POLR2AP24928 RNU1-103P-201ENST00000516502 125 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 OR5AK1P-201ENST00000524837 922 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.59□□□□□ -1.67
POLR2AP24928 AP002453.2-201ENST00000533503 320 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 RAB11AP2-201ENST00000545905 639 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 HMGB1P33-201ENST00000563485 527 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.59□□□□□ -1.67
POLR2AP24928 AC002553.4-201ENST00000616896 331 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 AC007742.2-201ENST00000618226 398 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 AC231657.1-201ENST00000624313 397 ntBASIC4.59□□□□□ -1.67
POLR2AP24928 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.59□□□□□ -1.67
POLR2AP24928 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
POLR2AP24928 MTCO1P12-201ENST00000414273 1543 ntBASIC4.59□□□□□ -1.68
POLR2AP24928 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
POLR2AP24928 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.59□□□□□ -1.68
POLR2AP24928 AC112198.2-201ENST00000426589 6996 ntBASIC4.59□□□□□ -1.68
POLR2AP24928 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
POLR2AP24928 AC109315.1-201ENST00000584143 1347 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 Y_RNA.97-201ENST00000363094 102 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 MIR16-1-201ENST00000385271 89 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 CIR1P3-201ENST00000405137 479 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AL121878.1-201ENST00000418638 859 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 RPS27AP14-201ENST00000422868 454 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
POLR2AP24928 VTI1BP4-201ENST00000427516 527 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.58□□□□□ -1.68
POLR2AP24928 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.58□□□□□ -1.68
POLR2AP24928 AL365400.1-201ENST00000431854 640 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC093019.1-201ENST00000443135 252 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 GDI2P2-201ENST00000445131 608 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC091544.1-201ENST00000484702 348 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.58□□□□□ -1.68
POLR2AP24928 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.58□□□□□ -1.68
POLR2AP24928 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.58□□□□□ -1.68
POLR2AP24928 AC105914.1-201ENST00000511798 226 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 OR6C73P-201ENST00000546432 358 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 AC063950.1-201ENST00000552036 308 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.58□□□□□ -1.68
POLR2AP24928 AC124068.1-201ENST00000563131 678 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.58□□□□□ -1.68
POLR2AP24928 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 AL121757.2-201ENST00000611223 313 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC025594.3-201ENST00000613068 790 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC023509.5-201ENST00000617434 807 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
POLR2AP24928 AC092326.2-201ENST00000624772 1561 ntBASIC4.58□□□□□ -1.68
POLR2AP24928 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
POLR2AP24928 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
POLR2AP24928 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
POLR2AP24928 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms