Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RFX1P22670 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFX1P22670 AC015799.1-201ENST00000622996 3122 ntBASIC6.11□□□□□ -1.43
RFX1P22670 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFX1P22670 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RFX1P22670 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RFX1P22670 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.11□□□□□ -1.43
RFX1P22670 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
RFX1P22670 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.1□□□□□ -1.43
RFX1P22670 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RFX1P22670 RNA5SP507-201ENST00000363603 121 ntBASIC6.1□□□□□ -1.43
RFX1P22670 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.1□□□□□ -1.43
RFX1P22670 SNORD116-29-201ENST00000384516 83 ntBASIC6.1□□□□□ -1.43
RFX1P22670 MIR548K-201ENST00000408406 116 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.1□□□□□ -1.43
RFX1P22670 AL591848.1-201ENST00000413092 322 ntBASIC6.1□□□□□ -1.43
RFX1P22670 RPL7P10-201ENST00000417407 739 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.1□□□□□ -1.43
RFX1P22670 HMGB3P24-201ENST00000433260 622 ntBASIC6.1□□□□□ -1.43
RFX1P22670 NPM1P18-201ENST00000434232 732 ntBASIC6.1□□□□□ -1.43
RFX1P22670 RPL21P112-201ENST00000434403 463 ntBASIC6.1□□□□□ -1.43
RFX1P22670 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 AC020550.1-201ENST00000447385 163 ntBASIC6.1□□□□□ -1.43
RFX1P22670 GAPDHP27-201ENST00000447427 1020 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.1□□□□□ -1.43
RFX1P22670 RPL21P8-201ENST00000465083 535 ntBASIC6.1□□□□□ -1.43
RFX1P22670 RN7SL188P-201ENST00000469842 285 ntBASIC6.1□□□□□ -1.43
RFX1P22670 VN1R17P-201ENST00000472048 1090 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AC012181.1-201ENST00000479895 423 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.1□□□□□ -1.43
RFX1P22670 RPL23AP55-201ENST00000498163 452 ntBASIC6.1□□□□□ -1.43
RFX1P22670 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.1□□□□□ -1.43
RFX1P22670 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.1□□□□□ -1.43
RFX1P22670 HMGN1P9-201ENST00000515212 298 ntBASIC6.1□□□□□ -1.43
RFX1P22670 SNORA70.11-201ENST00000515987 138 ntBASIC6.1□□□□□ -1.43
RFX1P22670 SNORA70.13-201ENST00000516116 138 ntBASIC6.1□□□□□ -1.43
RFX1P22670 Y_RNA.682-201ENST00000516457 100 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.1□□□□□ -1.43
RFX1P22670 AC090136.1-201ENST00000520009 240 ntBASIC6.1□□□□□ -1.43
RFX1P22670 ELOCP31-201ENST00000540463 467 ntBASIC6.1□□□□□ -1.43
RFX1P22670 OR11H5P-201ENST00000554039 926 ntBASIC6.1□□□□□ -1.43
RFX1P22670 MIR5583-1-201ENST00000580941 59 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.1□□□□□ -1.43
RFX1P22670 APOOP1-201ENST00000604695 592 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AC245389.1-201ENST00000605141 529 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AL139124.1-201ENST00000609123 421 ntBASIC6.1□□□□□ -1.43
RFX1P22670 Z82243.1-201ENST00000609432 473 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AL121612.2-201ENST00000612261 482 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AL031658.2-201ENST00000616850 651 ntBASIC6.1□□□□□ -1.43
RFX1P22670 MIR6837-201ENST00000620884 64 ntBASIC6.1□□□□□ -1.43
RFX1P22670 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.1□□□□□ -1.43
RFX1P22670 AC243312.2-201ENST00000623340 601 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AC110801.1-201ENST00000623590 212 ntBASIC6.1□□□□□ -1.43
RFX1P22670 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.1□□□□□ -1.43
RFX1P22670 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.1□□□□□ -1.43
RFX1P22670 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.1□□□□□ -1.43
RFX1P22670 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.1□□□□□ -1.43
RFX1P22670 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
RFX1P22670 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RFX1P22670 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RFX1P22670 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX1P22670 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFX1P22670 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX1P22670 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.09□□□□□ -1.43
RFX1P22670 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX1P22670 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFX1P22670 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RFX1P22670 AC092681.1-201ENST00000297369 291 ntBASIC6.09□□□□□ -1.43
RFX1P22670 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX1P22670 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RFX1P22670 RNU6-1155P-201ENST00000363554 107 ntBASIC6.09□□□□□ -1.43
RFX1P22670 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX1P22670 MIR223-201ENST00000385204 110 ntBASIC6.09□□□□□ -1.43
RFX1P22670 RNU6-550P-201ENST00000391057 101 ntBASIC6.09□□□□□ -1.43
RFX1P22670 RNU4-14P-201ENST00000410858 122 ntBASIC6.09□□□□□ -1.43
RFX1P22670 AC096921.1-201ENST00000411661 375 ntBASIC6.09□□□□□ -1.43
RFX1P22670 BMS1P17-202ENST00000416720 316 ntBASIC6.09□□□□□ -1.43
RFX1P22670 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX1P22670 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.09□□□□□ -1.43
RFX1P22670 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX1P22670 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.09□□□□□ -1.43
RFX1P22670 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.09□□□□□ -1.43
RFX1P22670 RNU7-152P-201ENST00000458982 64 ntBASIC6.09□□□□□ -1.43
RFX1P22670 RN7SL72P-201ENST00000460697 269 ntBASIC6.09□□□□□ -1.43
RFX1P22670 RPL32P33-201ENST00000487023 394 ntBASIC6.09□□□□□ -1.43
RFX1P22670 RN7SL591P-201ENST00000496150 292 ntBASIC6.09□□□□□ -1.43
RFX1P22670 NDUFB5P1-201ENST00000508134 564 ntBASIC6.09□□□□□ -1.43
RFX1P22670 AC005741.1-201ENST00000511094 432 ntBASIC6.09□□□□□ -1.43
RFX1P22670 AC026801.2-201ENST00000515352 425 ntBASIC6.09□□□□□ -1.43
RFX1P22670 RNU6-615P-201ENST00000516065 106 ntBASIC6.09□□□□□ -1.43
RFX1P22670 RNU6-1088P-201ENST00000516850 104 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms