Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 Y_RNA.322-201ENST00000365151 102 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 Y_RNA.324-201ENST00000365165 102 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL9A1P20849 Y_RNA.400-201ENST00000383963 111 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 RNU6-14P-201ENST00000384630 106 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 SNRPEP6-201ENST00000407465 277 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.46□□□□□ -1.38
COL9A1P20849 OR6D1P-201ENST00000436165 939 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 AP000936.3-201ENST00000438127 255 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 AL360271.2-201ENST00000447710 161 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 AC005077.1-201ENST00000449226 375 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 Y_RNA.650-201ENST00000459002 102 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 RN7SL738P-201ENST00000470264 297 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 RPL30P1-201ENST00000488676 339 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 AC020890.1-201ENST00000491837 504 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 YWHAEP4-201ENST00000505390 198 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 Y_RNA.777-201ENST00000516982 102 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 IGLVIV-53-201ENST00000520107 367 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL9A1P20849 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
COL9A1P20849 AC120057.2-201ENST00000571520 271 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 Y_RNA.771-201ENST00000598668 102 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 RPL7P50-201ENST00000600588 727 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 Y_RNA.789-201ENST00000622480 102 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC6.46□□□□□ -1.38
COL9A1P20849 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC6.46□□□□□ -1.38
COL9A1P20849 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL9A1P20849 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL9A1P20849 IQCB2P-201ENST00000401788 1633 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL9A1P20849 AC008758.3-201ENST00000507003 1829 ntBASIC6.46□□□□□ -1.38
COL9A1P20849 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 AC140479.2-201ENST00000421567 3130 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 AC024587.1-201ENST00000505925 2157 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
COL9A1P20849 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.45□□□□□ -1.38
COL9A1P20849 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.45□□□□□ -1.38
COL9A1P20849 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 RNU1-150P-201ENST00000362491 162 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 Y_RNA.275-201ENST00000364726 110 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 AC005042.1-201ENST00000393397 800 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 AC013442.1-201ENST00000397347 228 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 RPL31P2-201ENST00000413849 377 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 snoU109.4-201ENST00000458953 143 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.45□□□□□ -1.38
COL9A1P20849 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.45□□□□□ -1.38
COL9A1P20849 RN7SL643P-201ENST00000471845 291 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 SNORA72.7-201ENST00000516349 94 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC6.45□□□□□ -1.38
COL9A1P20849 CR383656.7-201ENST00000548164 174 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 H3F3AP1-201ENST00000559984 334 ntBASIC6.45□□□□□ -1.38
COL9A1P20849 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.45□□□□□ -1.38
COL9A1P20849 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.45□□□□□ -1.38
COL9A1P20849 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.45□□□□□ -1.38
COL9A1P20849 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL9A1P20849 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
COL9A1P20849 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
COL9A1P20849 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.45□□□□□ -1.38
COL9A1P20849 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL9A1P20849 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL9A1P20849 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC6.44□□□□□ -1.38
COL9A1P20849 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.44□□□□□ -1.38
COL9A1P20849 AC009962.1-201ENST00000567327 3813 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.44□□□□□ -1.38
COL9A1P20849 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
COL9A1P20849 AC110597.1-201ENST00000562669 3176 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL9A1P20849 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
COL9A1P20849 SNORD16-201ENST00000362803 99 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 RN7SKP124-201ENST00000364730 341 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 Y_RNA.597-201ENST00000410463 100 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 CYCSP33-201ENST00000414485 327 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 AC010154.1-201ENST00000425857 269 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.44□□□□□ -1.38
COL9A1P20849 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.44□□□□□ -1.38
COL9A1P20849 RN7SL172P-201ENST00000460535 303 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 AC006427.1-201ENST00000514359 712 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 RNU6-347P-201ENST00000516658 105 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 IGHV4-55-201ENST00000520889 368 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL9A1P20849 AC023824.2-201ENST00000566185 400 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 AC104581.2-201ENST00000572227 430 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 RN7SL652P-201ENST00000577769 300 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 MIR548AC-201ENST00000585049 88 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 SNORD113-5-201ENST00000607261 78 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 AC009318.2-201ENST00000610917 651 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 MIR6130-201ENST00000619419 109 ntBASIC6.44□□□□□ -1.38
COL9A1P20849 AC241377.1-201ENST00000619797 406 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms