Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.53□□□□□ -2
CTLA4P16410 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.53□□□□□ -2
CTLA4P16410 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.52□□□□□ -2.01
CTLA4P16410 SEC63P2-201ENST00000503863 1939 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 AC092593.1-201ENST00000515413 1815 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.52□□□□□ -2.01
CTLA4P16410 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CTLA4P16410 RNU1-101P-201ENST00000391171 127 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 RPS3AP26-201ENST00000398259 784 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 AL356057.1-202ENST00000402263 756 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 AL590004.2-201ENST00000404787 371 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 AL138885.1-201ENST00000405921 675 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.52□□□□□ -2.01
CTLA4P16410 MRPL50P2-201ENST00000416821 482 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 YPEL5P1-201ENST00000419731 367 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 OFD1P18Y-201ENST00000420889 959 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 AC233728.2-201ENST00000425348 757 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 FABP5P3-201ENST00000437960 408 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 RPS26P56-201ENST00000444468 240 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 AC112492.1-201ENST00000449607 712 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 RPL36AP33-201ENST00000450395 310 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 NIPA2P5-201ENST00000452282 464 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 MTND2P3-201ENST00000452458 470 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 RNF138P1-201ENST00000502765 546 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.52□□□□□ -2.01
CTLA4P16410 SLC25A15P5-201ENST00000508033 253 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.52□□□□□ -2.01
CTLA4P16410 RN7SKP57-201ENST00000517248 293 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 RNU6-711P-201ENST00000517255 106 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.52□□□□□ -2.01
CTLA4P16410 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.52□□□□□ -2.01
CTLA4P16410 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.52□□□□□ -2.01
CTLA4P16410 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.52□□□□□ -2.01
CTLA4P16410 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.52□□□□□ -2.01
CTLA4P16410 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.52□□□□□ -2.01
CTLA4P16410 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.52□□□□□ -2.01
CTLA4P16410 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 CYCSP41-201ENST00000616920 296 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 AC017104.5-201ENST00000637647 639 ntBASIC2.52□□□□□ -2.01
CTLA4P16410 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTLA4P16410 FAM35CP-201ENST00000554755 2470 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AL161431.1-201ENST00000618966 4205 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTLA4P16410 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTLA4P16410 ASNSP3-201ENST00000451989 1306 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC096644.4-201ENST00000563417 2912 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC016716.1-201ENST00000265882 708 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 DYNLT3P1-201ENST00000378574 347 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 RNU6-851P-201ENST00000384565 107 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 SNORA11C-201ENST00000408532 129 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 RNU6-1077P-201ENST00000410506 102 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AL024507.1-201ENST00000412741 274 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.51□□□□□ -2.01
CTLA4P16410 AC127537.2-201ENST00000439258 465 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 UBE2V1P5-201ENST00000440070 405 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC004865.1-201ENST00000442276 1003 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.51□□□□□ -2.01
CTLA4P16410 AP001992.1-205ENST00000462248 379 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC003982.1-202ENST00000469928 248 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.51□□□□□ -2.01
CTLA4P16410 DYNLL1P6-201ENST00000503440 264 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC083906.5-201ENST00000503722 328 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.51□□□□□ -2.01
CTLA4P16410 AC133963.2-201ENST00000513686 578 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 RNA5SP341-201ENST00000516261 117 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AP000857.1-201ENST00000532151 543 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CTLA4P16410 HPRT1P3-201ENST00000539521 576 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 MIR5195-201ENST00000583555 115 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 SNORD84-203ENST00000584275 78 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 BDH2P1-201ENST00000602288 736 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC040174.2-201ENST00000602701 465 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC091488.1-201ENST00000604239 660 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC107871.2-201ENST00000612894 502 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AL442067.2-201ENST00000614033 363 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.51□□□□□ -2.01
CTLA4P16410 AC068831.7-201ENST00000616954 363 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AP003400.6-201ENST00000624698 740 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 AC084035.1-201ENST00000634543 607 ntBASIC2.51□□□□□ -2.01
CTLA4P16410 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CTLA4P16410 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTLA4P16410 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CTLA4P16410 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.51□□□□□ -2.01
CTLA4P16410 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.5□□□□□ -2.01
CTLA4P16410 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CTLA4P16410 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CTLA4P16410 AC073346.2-201ENST00000624724 2058 ntBASIC2.5□□□□□ -2.01
CTLA4P16410 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CTLA4P16410 MIR208A-201ENST00000362287 71 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms