Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CD44P16070 TMCC1P1-201ENST00000518897 1980 ntBASIC7.37□□□□□ -1.23
CD44P16070 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.37□□□□□ -1.23
CD44P16070 AL031119.1-201ENST00000404707 1879 ntBASIC7.36□□□□□ -1.23
CD44P16070 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CD44P16070 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CD44P16070 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CD44P16070 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CD44P16070 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CD44P16070 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CD44P16070 RNU6-395P-201ENST00000365662 106 ntBASIC7.36□□□□□ -1.23
CD44P16070 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.36□□□□□ -1.23
CD44P16070 RNU6-106P-201ENST00000384405 107 ntBASIC7.36□□□□□ -1.23
CD44P16070 RNU6-1152P-201ENST00000384576 107 ntBASIC7.36□□□□□ -1.23
CD44P16070 RNU6-817P-201ENST00000391083 104 ntBASIC7.36□□□□□ -1.23
CD44P16070 AL359694.1-201ENST00000403247 604 ntBASIC7.36□□□□□ -1.23
CD44P16070 AC063979.1-201ENST00000415539 377 ntBASIC7.36□□□□□ -1.23
CD44P16070 EDDM3CP-201ENST00000415977 425 ntBASIC7.36□□□□□ -1.23
CD44P16070 MICG-208ENST00000416822 132 ntBASIC7.36□□□□□ -1.23
CD44P16070 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC7.36□□□□□ -1.23
CD44P16070 AL133445.1-201ENST00000467051 452 ntBASIC7.36□□□□□ -1.23
CD44P16070 RPL23AP2-201ENST00000471227 466 ntBASIC7.36□□□□□ -1.23
CD44P16070 AC093664.1-201ENST00000511779 289 ntBASIC7.36□□□□□ -1.23
CD44P16070 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.36□□□□□ -1.23
CD44P16070 AP001318.4-201ENST00000616637 121 ntBASIC7.36□□□□□ -1.23
CD44P16070 MIR665-201ENST00000635949 72 ntBASIC7.36□□□□□ -1.23
CD44P16070 MIR6844-201ENST00000637122 62 ntBASIC7.36□□□□□ -1.23
CD44P16070 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
CD44P16070 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CD44P16070 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.36□□□□□ -1.23
CD44P16070 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.36□□□□□ -1.23
CD44P16070 CUL1P1-201ENST00000509510 2425 ntBASIC7.36□□□□□ -1.23
CD44P16070 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CD44P16070 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC7.35□□□□□ -1.23
CD44P16070 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CD44P16070 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
CD44P16070 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CD44P16070 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CD44P16070 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.35□□□□□ -1.23
CD44P16070 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 RNU1-56P-201ENST00000391303 164 ntBASIC7.35□□□□□ -1.23
CD44P16070 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.35□□□□□ -1.23
CD44P16070 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.35□□□□□ -1.23
CD44P16070 GRPEL2P2-201ENST00000421856 670 ntBASIC7.35□□□□□ -1.23
CD44P16070 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.35□□□□□ -1.23
CD44P16070 RPL7AP23-201ENST00000482625 776 ntBASIC7.35□□□□□ -1.23
CD44P16070 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC7.35□□□□□ -1.23
CD44P16070 RNU1-86P-201ENST00000516108 154 ntBASIC7.35□□□□□ -1.23
CD44P16070 RNU1-107P-201ENST00000516617 154 ntBASIC7.35□□□□□ -1.23
CD44P16070 SNRPCP6-201ENST00000528310 210 ntBASIC7.35□□□□□ -1.23
CD44P16070 OR1F2P-201ENST00000570470 933 ntBASIC7.35□□□□□ -1.23
CD44P16070 MIR4504-201ENST00000577413 92 ntBASIC7.35□□□□□ -1.23
CD44P16070 Y_RNA.757-201ENST00000578934 114 ntBASIC7.35□□□□□ -1.23
CD44P16070 RN7SL426P-201ENST00000579106 295 ntBASIC7.35□□□□□ -1.23
CD44P16070 AC060766.3-201ENST00000591442 263 ntBASIC7.35□□□□□ -1.23
CD44P16070 AC097467.4-201ENST00000605504 141 ntBASIC7.35□□□□□ -1.23
CD44P16070 AC004832.5-201ENST00000608677 401 ntBASIC7.35□□□□□ -1.23
CD44P16070 AL596275.2-208ENST00000641192 594 ntBASIC7.35□□□□□ -1.23
CD44P16070 AC110373.1-201ENST00000505994 3505 ntBASIC7.35□□□□□ -1.23
CD44P16070 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.35□□□□□ -1.23
CD44P16070 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 AC104581.5-201ENST00000624171 7141 ntBASIC7.35□□□□□ -1.23
CD44P16070 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CD44P16070 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CD44P16070 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CD44P16070 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CD44P16070 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC7.34□□□□□ -1.23
CD44P16070 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
CD44P16070 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CD44P16070 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CD44P16070 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CD44P16070 Y_RNA.221-201ENST00000364248 96 ntBASIC7.34□□□□□ -1.23
CD44P16070 RNU4-9P-201ENST00000364951 139 ntBASIC7.34□□□□□ -1.23
CD44P16070 RN7SKP189-201ENST00000365042 330 ntBASIC7.34□□□□□ -1.23
CD44P16070 RNU6-407P-201ENST00000365280 104 ntBASIC7.34□□□□□ -1.23
CD44P16070 RNU6-820P-201ENST00000384273 107 ntBASIC7.34□□□□□ -1.23
CD44P16070 RNU1-46P-201ENST00000384425 164 ntBASIC7.34□□□□□ -1.23
CD44P16070 MIR187-201ENST00000385062 109 ntBASIC7.34□□□□□ -1.23
CD44P16070 RNA5SP213-201ENST00000391031 106 ntBASIC7.34□□□□□ -1.23
CD44P16070 RPL18AP14-201ENST00000417685 526 ntBASIC7.34□□□□□ -1.23
CD44P16070 AL163193.1-201ENST00000444895 788 ntBASIC7.34□□□□□ -1.23
CD44P16070 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC7.34□□□□□ -1.23
CD44P16070 AC010655.1-201ENST00000449336 292 ntBASIC7.34□□□□□ -1.23
CD44P16070 AC005042.3-201ENST00000453230 174 ntBASIC7.34□□□□□ -1.23
CD44P16070 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.34□□□□□ -1.23
CD44P16070 RPS27AP13-201ENST00000498403 237 ntBASIC7.34□□□□□ -1.23
CD44P16070 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.34□□□□□ -1.23
CD44P16070 RN7SKP49-201ENST00000516675 260 ntBASIC7.34□□□□□ -1.23
CD44P16070 IGKV1D-32-201ENST00000517449 318 ntBASIC7.34□□□□□ -1.23
CD44P16070 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms