Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 SFR1P2-201ENST00000421841 730 ntBASIC2.51□□□□□ -2.01
CD28P10747 COTL1P1-201ENST00000422309 375 ntBASIC2.51□□□□□ -2.01
CD28P10747 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.51□□□□□ -2.01
CD28P10747 BX890604.2-201ENST00000427883 474 ntBASIC2.51□□□□□ -2.01
CD28P10747 FO393414.1-201ENST00000428697 1184 ntBASIC2.51□□□□□ -2.01
CD28P10747 RPL23AP69-201ENST00000431134 458 ntBASIC2.51□□□□□ -2.01
CD28P10747 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.51□□□□□ -2.01
CD28P10747 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.51□□□□□ -2.01
CD28P10747 ELOCP13-201ENST00000443934 329 ntBASIC2.51□□□□□ -2.01
CD28P10747 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 RPL7P59-201ENST00000447700 943 ntBASIC2.51□□□□□ -2.01
CD28P10747 AC004022.1-201ENST00000447766 1066 ntBASIC2.51□□□□□ -2.01
CD28P10747 RSL24D1P3-201ENST00000449255 495 ntBASIC2.51□□□□□ -2.01
CD28P10747 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.51□□□□□ -2.01
CD28P10747 AC092754.2-201ENST00000463506 460 ntBASIC2.51□□□□□ -2.01
CD28P10747 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 AP002884.2-201ENST00000471647 395 ntBASIC2.51□□□□□ -2.01
CD28P10747 RPL23AP44-201ENST00000482216 473 ntBASIC2.51□□□□□ -2.01
CD28P10747 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 HMGB3P15-201ENST00000507326 574 ntBASIC2.51□□□□□ -2.01
CD28P10747 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 RN7SKP244-201ENST00000516513 307 ntBASIC2.51□□□□□ -2.01
CD28P10747 RNA5SP135-201ENST00000517019 125 ntBASIC2.51□□□□□ -2.01
CD28P10747 RN7SKP289-201ENST00000517244 295 ntBASIC2.51□□□□□ -2.01
CD28P10747 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 AP001207.1-201ENST00000524051 481 ntBASIC2.51□□□□□ -2.01
CD28P10747 AP004371.1-201ENST00000525240 214 ntBASIC2.51□□□□□ -2.01
CD28P10747 AP003385.6-201ENST00000531603 374 ntBASIC2.51□□□□□ -2.01
CD28P10747 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.51□□□□□ -2.01
CD28P10747 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.51□□□□□ -2.01
CD28P10747 LARP7P3-201ENST00000579888 337 ntBASIC2.51□□□□□ -2.01
CD28P10747 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.51□□□□□ -2.01
CD28P10747 AC103881.1-201ENST00000603476 538 ntBASIC2.51□□□□□ -2.01
CD28P10747 AC002487.1-201ENST00000604565 994 ntBASIC2.51□□□□□ -2.01
CD28P10747 ATP5A1P2-202ENST00000616464 443 ntBASIC2.51□□□□□ -2.01
CD28P10747 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CD28P10747 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.5□□□□□ -2.01
CD28P10747 AC002546.1-201ENST00000588041 2504 ntBASIC2.5□□□□□ -2.01
CD28P10747 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.5□□□□□ -2.01
CD28P10747 AC118273.1-201ENST00000525324 3006 ntBASIC2.5□□□□□ -2.01
CD28P10747 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CD28P10747 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CD28P10747 RNU6-251P-201ENST00000363235 104 ntBASIC2.5□□□□□ -2.01
CD28P10747 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CD28P10747 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.5□□□□□ -2.01
CD28P10747 MIR591-201ENST00000385290 95 ntBASIC2.5□□□□□ -2.01
CD28P10747 RNU6-837P-201ENST00000391056 108 ntBASIC2.5□□□□□ -2.01
CD28P10747 RNU6-575P-201ENST00000411326 105 ntBASIC2.5□□□□□ -2.01
CD28P10747 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.5□□□□□ -2.01
CD28P10747 AC012065.2-201ENST00000421295 375 ntBASIC2.5□□□□□ -2.01
CD28P10747 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.5□□□□□ -2.01
CD28P10747 GLRXP1-201ENST00000423261 334 ntBASIC2.5□□□□□ -2.01
CD28P10747 RPL31P54-201ENST00000429803 370 ntBASIC2.5□□□□□ -2.01
CD28P10747 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.5□□□□□ -2.01
CD28P10747 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.5□□□□□ -2.01
CD28P10747 BX679664.1-201ENST00000434429 253 ntBASIC2.5□□□□□ -2.01
CD28P10747 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.5□□□□□ -2.01
CD28P10747 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.5□□□□□ -2.01
CD28P10747 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.5□□□□□ -2.01
CD28P10747 NANOGNBP1-201ENST00000448444 480 ntBASIC2.5□□□□□ -2.01
CD28P10747 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.5□□□□□ -2.01
CD28P10747 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.5□□□□□ -2.01
CD28P10747 NPM1P13-201ENST00000452663 865 ntBASIC2.5□□□□□ -2.01
CD28P10747 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.5□□□□□ -2.01
CD28P10747 HMGN1P18-201ENST00000457642 277 ntBASIC2.5□□□□□ -2.01
CD28P10747 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.5□□□□□ -2.01
CD28P10747 VN1R17P-201ENST00000472048 1090 ntBASIC2.5□□□□□ -2.01
CD28P10747 RPS3AP14-201ENST00000483907 780 ntBASIC2.5□□□□□ -2.01
CD28P10747 AC011825.1-201ENST00000484967 388 ntBASIC2.5□□□□□ -2.01
CD28P10747 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.5□□□□□ -2.01
CD28P10747 AC026414.1-201ENST00000504046 698 ntBASIC2.5□□□□□ -2.01
CD28P10747 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.5□□□□□ -2.01
CD28P10747 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.5□□□□□ -2.01
CD28P10747 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.5□□□□□ -2.01
CD28P10747 ARL2BPP5-201ENST00000523141 481 ntBASIC2.5□□□□□ -2.01
CD28P10747 AC006518.1-201ENST00000541449 943 ntBASIC2.5□□□□□ -2.01
CD28P10747 AC006518.2-201ENST00000542513 940 ntBASIC2.5□□□□□ -2.01
CD28P10747 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.5□□□□□ -2.01
CD28P10747 EIF4BP1-201ENST00000554881 351 ntBASIC2.5□□□□□ -2.01
CD28P10747 AC093510.2-201ENST00000562820 896 ntBASIC2.5□□□□□ -2.01
CD28P10747 UBL5P2-201ENST00000583788 219 ntBASIC2.5□□□□□ -2.01
CD28P10747 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.5□□□□□ -2.01
CD28P10747 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.5□□□□□ -2.01
CD28P10747 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.5□□□□□ -2.01
CD28P10747 SNORD39.4-201ENST00000620099 78 ntBASIC2.5□□□□□ -2.01
CD28P10747 AC110801.1-201ENST00000623590 212 ntBASIC2.5□□□□□ -2.01
CD28P10747 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms