Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 BX682237.1-201ENST00000415016 335 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 MTCO3P12-201ENST00000416718 547 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 AL389915.1-201ENST00000422463 466 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 UBBP3-201ENST00000445497 241 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 RPL37P4-201ENST00000448908 268 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 OR51B8P-201ENST00000449892 769 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.1□□□□□ -2.07
CXCL1P09341 AC091153.1-201ENST00000466297 402 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 RN7SL293P-201ENST00000481765 281 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 RNF138P1-201ENST00000502765 546 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 VN1R104P-201ENST00000505115 1009 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 PCNAP1-201ENST00000505363 709 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.1□□□□□ -2.07
CXCL1P09341 RNA5SP82-201ENST00000516707 92 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 IGKV2D-36-201ENST00000518643 226 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.1□□□□□ -2.07
CXCL1P09341 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.1□□□□□ -2.07
CXCL1P09341 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.1□□□□□ -2.07
CXCL1P09341 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.1□□□□□ -2.07
CXCL1P09341 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.1□□□□□ -2.07
CXCL1P09341 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.1□□□□□ -2.07
CXCL1P09341 AL669831.4-202ENST00000590817 238 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 AC009570.1-201ENST00000609599 745 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.1□□□□□ -2.07
CXCL1P09341 AC012442.3-202ENST00000636742 206 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL1P09341 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CXCL1P09341 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CXCL1P09341 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
CXCL1P09341 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CXCL1P09341 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.09□□□□□ -2.07
CXCL1P09341 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CXCL1P09341 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CXCL1P09341 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CXCL1P09341 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL1P09341 SNORD56.5-201ENST00000364281 72 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 U8.8-201ENST00000365399 135 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 SNORA54-201ENST00000384281 123 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 MIR554-201ENST00000384874 96 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 ANAPC10P1-201ENST00000395991 556 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 FO393413.1-201ENST00000402892 195 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 GSTA8P-201ENST00000404253 637 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 U3.37-201ENST00000408528 213 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.09□□□□□ -2.07
CXCL1P09341 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL1P09341 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CXCL1P09341 AC073508.1-201ENST00000428866 656 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 SUMO1P4-201ENST00000429430 302 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC091286.1-201ENST00000431233 461 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CXCL1P09341 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL1P09341 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL1P09341 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL1P09341 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.09□□□□□ -2.07
CXCL1P09341 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL1P09341 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.09□□□□□ -2.07
CXCL1P09341 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.09□□□□□ -2.07
CXCL1P09341 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL1P09341 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL1P09341 MIR5680-201ENST00000577577 84 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.09□□□□□ -2.07
CXCL1P09341 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.09□□□□□ -2.07
CXCL1P09341 AC020895.1-201ENST00000595362 272 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC008687.2-201ENST00000597865 520 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC135178.6-201ENST00000605314 398 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.09□□□□□ -2.07
CXCL1P09341 MIR6076-201ENST00000617521 113 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC068831.8-201ENST00000620171 435 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC097372.4-201ENST00000625025 466 ntBASIC2.09□□□□□ -2.07
CXCL1P09341 AC024341.1-201ENST00000526444 1552 ntBASIC2.09□□□□□ -2.08
CXCL1P09341 AC109315.1-201ENST00000584143 1347 ntBASIC2.09□□□□□ -2.08
CXCL1P09341 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CXCL1P09341 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
CXCL1P09341 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.09□□□□□ -2.08
CXCL1P09341 ZNF734P-201ENST00000419494 1534 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 SNORA71.1-201ENST00000364523 117 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 RNU1-100P-201ENST00000365255 165 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 RNU1-64P-201ENST00000365443 163 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AC073264.1-201ENST00000411508 416 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AC010385.1-201ENST00000412374 256 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL1P09341 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL1P09341 HSFY1P1-201ENST00000423928 1178 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AL159987.2-201ENST00000432754 307 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL1P09341 MTCYBP34-201ENST00000439552 670 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL1P09341 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.08□□□□□ -2.08
CXCL1P09341 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.08□□□□□ -2.08
CXCL1P09341 AC103987.1-201ENST00000473394 348 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AC009901.1-201ENST00000506703 541 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 RPL37P25-201ENST00000507308 276 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.08□□□□□ -2.08
CXCL1P09341 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.08□□□□□ -2.08
CXCL1P09341 RNA5SP367-201ENST00000516557 118 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 AC087373.1-201ENST00000524920 491 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 PSMA2P1-201ENST00000526365 646 ntBASIC2.08□□□□□ -2.08
CXCL1P09341 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
CXCL1P09341 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms