Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VIMP08670 MTND5P24-201ENST00000438892 1767 ntBASIC3.62□□□□□ -1.83
VIMP08670 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VIMP08670 RNU6-621P-201ENST00000364752 109 ntBASIC3.62□□□□□ -1.83
VIMP08670 Y_RNA.311-201ENST00000365068 96 ntBASIC3.62□□□□□ -1.83
VIMP08670 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.62□□□□□ -1.83
VIMP08670 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
VIMP08670 AL592310.1-201ENST00000414330 671 ntBASIC3.62□□□□□ -1.83
VIMP08670 CRYBB2P1-203ENST00000415709 538 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.62□□□□□ -1.83
VIMP08670 AC068533.1-201ENST00000418542 415 ntBASIC3.62□□□□□ -1.83
VIMP08670 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.62□□□□□ -1.83
VIMP08670 AC019178.2-201ENST00000423595 505 ntBASIC3.62□□□□□ -1.83
VIMP08670 AL590233.1-201ENST00000430017 456 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC084290.1-201ENST00000434995 374 ntBASIC3.62□□□□□ -1.83
VIMP08670 HMGB1P12-201ENST00000438594 598 ntBASIC3.62□□□□□ -1.83
VIMP08670 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VIMP08670 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.62□□□□□ -1.83
VIMP08670 Z95327.1-201ENST00000446082 482 ntBASIC3.62□□□□□ -1.83
VIMP08670 RPL26P28-201ENST00000451325 435 ntBASIC3.62□□□□□ -1.83
VIMP08670 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.62□□□□□ -1.83
VIMP08670 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.62□□□□□ -1.83
VIMP08670 AC104308.1-201ENST00000454621 333 ntBASIC3.62□□□□□ -1.83
VIMP08670 SUMO2P2-201ENST00000456482 255 ntBASIC3.62□□□□□ -1.83
VIMP08670 ARPC3P2-201ENST00000457786 533 ntBASIC3.62□□□□□ -1.83
VIMP08670 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.62□□□□□ -1.83
VIMP08670 RPS27AP1-201ENST00000475545 471 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC105137.1-201ENST00000484355 562 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.62□□□□□ -1.83
VIMP08670 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.62□□□□□ -1.83
VIMP08670 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.62□□□□□ -1.83
VIMP08670 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC034205.1-201ENST00000520621 638 ntBASIC3.62□□□□□ -1.83
VIMP08670 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.62□□□□□ -1.83
VIMP08670 HSPA8P13-201ENST00000523715 472 ntBASIC3.62□□□□□ -1.83
VIMP08670 AP003730.1-201ENST00000524605 285 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC023161.2-201ENST00000551218 780 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.62□□□□□ -1.83
VIMP08670 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.62□□□□□ -1.83
VIMP08670 AC022662.1-201ENST00000580252 331 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.62□□□□□ -1.83
VIMP08670 AC080013.4-201ENST00000607624 649 ntBASIC3.62□□□□□ -1.83
VIMP08670 AC114781.5-201ENST00000615297 108 ntBASIC3.62□□□□□ -1.83
VIMP08670 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.62□□□□□ -1.83
VIMP08670 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
VIMP08670 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VIMP08670 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VIMP08670 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VIMP08670 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
VIMP08670 OR6C69P-201ENST00000394268 893 ntBASIC3.61□□□□□ -1.83
VIMP08670 RNU2-71P-201ENST00000411395 189 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC126124.2-201ENST00000413542 321 ntBASIC3.61□□□□□ -1.83
VIMP08670 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.61□□□□□ -1.83
VIMP08670 AC245052.5-201ENST00000416320 649 ntBASIC3.61□□□□□ -1.83
VIMP08670 ELOCP9-201ENST00000418624 239 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.61□□□□□ -1.83
VIMP08670 AC007742.1-201ENST00000425789 329 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC079780.1-201ENST00000428259 207 ntBASIC3.61□□□□□ -1.83
VIMP08670 ELOCP26-201ENST00000436067 329 ntBASIC3.61□□□□□ -1.83
VIMP08670 COX7BP2-201ENST00000437976 242 ntBASIC3.61□□□□□ -1.83
VIMP08670 MTND4P6-201ENST00000438297 472 ntBASIC3.61□□□□□ -1.83
VIMP08670 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VIMP08670 AP001992.1-205ENST00000462248 379 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC093267.1-201ENST00000489176 961 ntBASIC3.61□□□□□ -1.83
VIMP08670 AL024509.2-201ENST00000493462 493 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.61□□□□□ -1.83
VIMP08670 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VIMP08670 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.61□□□□□ -1.83
VIMP08670 AC006499.2-201ENST00000513470 337 ntBASIC3.61□□□□□ -1.83
VIMP08670 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.61□□□□□ -1.83
VIMP08670 AP006245.1-201ENST00000522549 120 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.61□□□□□ -1.83
VIMP08670 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.61□□□□□ -1.83
VIMP08670 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.61□□□□□ -1.83
VIMP08670 AL163153.1-201ENST00000554223 283 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.61□□□□□ -1.83
VIMP08670 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.61□□□□□ -1.83
VIMP08670 AC091057.2-201ENST00000602594 792 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC080013.3-201ENST00000606839 578 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC006023.2-201ENST00000609916 167 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.61□□□□□ -1.83
VIMP08670 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
VIMP08670 AC006386.1-201ENST00000619436 415 ntBASIC3.61□□□□□ -1.83
VIMP08670 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.61□□□□□ -1.83
VIMP08670 AL357559.1-201ENST00000622228 274 ntBASIC3.61□□□□□ -1.83
VIMP08670 AC231657.1-201ENST00000624313 397 ntBASIC3.61□□□□□ -1.83
VIMP08670 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.61□□□□□ -1.83
VIMP08670 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.61□□□□□ -1.83
VIMP08670 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.61□□□□□ -1.83
VIMP08670 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VIMP08670 OR5BR1P-201ENST00000524992 1330 ntBASIC3.61□□□□□ -1.83
VIMP08670 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.61□□□□□ -1.83
VIMP08670 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VIMP08670 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.6□□□□□ -1.83
VIMP08670 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.6□□□□□ -1.83
VIMP08670 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VIMP08670 TAF9BP1-201ENST00000396646 746 ntBASIC3.6□□□□□ -1.83
VIMP08670 RPL23AP29-201ENST00000397284 453 ntBASIC3.6□□□□□ -1.83
VIMP08670 HMGB1P17-201ENST00000403495 628 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms