Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC008507.2-201ENST00000588402 1176 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC012119.1-201ENST00000603184 222 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC024220.1-201ENST00000603675 484 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 uc_338.25-201ENST00000613756 156 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 MIR8058-201ENST00000615737 89 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC006249.1-201ENST00000621223 471 ntBASIC2.78□□□□□ -1.96
HLA-DPB1P04440 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DPB1P04440 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.78□□□□□ -1.97
HLA-DPB1P04440 ZNF734P-201ENST00000419494 1534 ntBASIC2.78□□□□□ -1.97
HLA-DPB1P04440 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 RNU6-839P-201ENST00000363347 108 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 RNVU1-14-201ENST00000384770 164 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 MT-TC-201ENST00000387405 66 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AL035410.1-201ENST00000427409 427 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC092634.2-201ENST00000428146 1010 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC005345.1-201ENST00000431868 217 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AL592437.1-201ENST00000443781 492 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 SYPL1P1-201ENST00000473622 768 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 RN7SL633P-201ENST00000488974 297 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 TRAV31-201ENST00000502780 342 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 OR5H5P-201ENST00000503164 928 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 RNA5SP135-201ENST00000517019 125 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 HIGD1AP10-201ENST00000527837 282 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC068339.2-201ENST00000534395 618 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AL669831.4-202ENST00000590817 238 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 VN1R87P-201ENST00000596706 487 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC009464.1-201ENST00000615731 469 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 U73479.1-201ENST00000618062 168 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC068722.2-201ENST00000618734 544 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DPB1P04440 AC130650.2-201ENST00000618736 2403 ntBASIC2.77□□□□□ -1.97
HLA-DPB1P04440 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AF127577.6-201ENST00000623352 2191 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 SNORA31-201ENST00000362607 130 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 RNU6-115P-201ENST00000364310 107 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 RNA5SP72-201ENST00000364442 117 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 MIR217-201ENST00000384817 110 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 HSPE1P26-201ENST00000405341 275 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AL138880.1-201ENST00000405824 642 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 MTND2P16-201ENST00000419987 799 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 FNDC3CP-201ENST00000420795 1155 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC091862.1-201ENST00000438016 1100 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC091153.1-201ENST00000466297 402 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 GAPDHP39-201ENST00000481866 979 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC104629.1-201ENST00000494226 508 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC026414.1-201ENST00000504046 698 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC016550.1-201ENST00000505348 785 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 HMGB3P15-201ENST00000507326 574 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 snoZ278.1-201ENST00000517059 112 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC023632.1-201ENST00000518463 375 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms