Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.69□□□□□ -1.98
COL4A1P02462 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.69□□□□□ -1.98
COL4A1P02462 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.69□□□□□ -1.98
COL4A1P02462 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A1P02462 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.69□□□□□ -1.98
COL4A1P02462 CYP3A51P-201ENST00000633513 256 ntBASIC2.69□□□□□ -1.98
COL4A1P02462 AC093909.5-201ENST00000621839 1799 ntBASIC2.68□□□□□ -1.98
COL4A1P02462 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A1P02462 ZNF72P-201ENST00000425869 1908 ntBASIC2.68□□□□□ -1.98
COL4A1P02462 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A1P02462 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A1P02462 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A1P02462 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL4A1P02462 NCSTNP1-201ENST00000406229 144 ntBASIC2.68□□□□□ -1.98
COL4A1P02462 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.68□□□□□ -1.98
COL4A1P02462 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.68□□□□□ -1.98
COL4A1P02462 FAM92A1P2-202ENST00000504766 877 ntBASIC2.68□□□□□ -1.98
COL4A1P02462 AC107222.1-201ENST00000510899 637 ntBASIC2.68□□□□□ -1.98
COL4A1P02462 AC010680.4-201ENST00000605334 543 ntBASIC2.68□□□□□ -1.98
COL4A1P02462 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
COL4A1P02462 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COL4A1P02462 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.67□□□□□ -1.98
COL4A1P02462 VTA1P1-201ENST00000414044 866 ntBASIC2.67□□□□□ -1.98
COL4A1P02462 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL4A1P02462 NPM1P49-201ENST00000448027 714 ntBASIC2.67□□□□□ -1.98
COL4A1P02462 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.67□□□□□ -1.98
COL4A1P02462 AC132942.1-201ENST00000486753 483 ntBASIC2.67□□□□□ -1.98
COL4A1P02462 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.67□□□□□ -1.98
COL4A1P02462 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.67□□□□□ -1.98
COL4A1P02462 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.67□□□□□ -1.98
COL4A1P02462 MTCO1P9-201ENST00000505577 1534 ntBASIC2.67□□□□□ -1.98
COL4A1P02462 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.67□□□□□ -1.98
COL4A1P02462 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.66□□□□□ -1.98
COL4A1P02462 DHFRP5-201ENST00000406944 564 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 SNORA81-201ENST00000408493 178 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 AL031736.2-201ENST00000426573 787 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 AL118520.1-201ENST00000450770 291 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.66□□□□□ -1.98
COL4A1P02462 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.66□□□□□ -1.98
COL4A1P02462 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC019227.1-201ENST00000526902 510 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 AC107294.3-201ENST00000609211 526 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 AP003072.5-201ENST00000623872 773 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
COL4A1P02462 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC009487.2-201ENST00000420969 6821 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A1P02462 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.66□□□□□ -1.98
COL4A1P02462 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
COL4A1P02462 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A1P02462 AC066616.2-201ENST00000559334 1481 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 AL356292.1-201ENST00000283110 373 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 RNU6-167P-201ENST00000384292 106 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 SNORA17.3-201ENST00000391159 129 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 AC239798.3-201ENST00000454459 408 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.66□□□□□ -1.98
COL4A1P02462 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A1P02462 OR4R2P-201ENST00000530815 597 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC245517.5-201ENST00000611529 162 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 YWHAEP7-203ENST00000622054 312 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
COL4A1P02462 AC093591.3-201ENST00000634516 308 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.66□□□□□ -1.98
COL4A1P02462 CU459211.1-201ENST00000635667 749 ntBASIC2.66□□□□□ -1.98
COL4A1P02462 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
COL4A1P02462 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.66□□□□□ -1.98
COL4A1P02462 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.65□□□□□ -1.98
COL4A1P02462 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.65□□□□□ -1.98
COL4A1P02462 SNORA62.2-201ENST00000364672 152 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 AL354719.1-201ENST00000406535 843 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.65□□□□□ -1.99
COL4A1P02462 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.65□□□□□ -1.99
COL4A1P02462 RPL23AP44-201ENST00000482216 473 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 AC092185.1-201ENST00000491371 97 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.65□□□□□ -1.99
COL4A1P02462 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.65□□□□□ -1.99
COL4A1P02462 AC015712.3-201ENST00000559380 164 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.65□□□□□ -1.99
COL4A1P02462 AL161912.3-201ENST00000605404 628 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.65□□□□□ -1.99
COL4A1P02462 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
COL4A1P02462 AC117529.2-201ENST00000512159 2068 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
COL4A1P02462 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
COL4A1P02462 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
COL4A1P02462 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.65□□□□□ -1.99
COL4A1P02462 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A1P02462 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A1P02462 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A1P02462 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.64□□□□□ -1.99
COL4A1P02462 HSPA8P4-201ENST00000511877 1920 ntBASIC2.64□□□□□ -1.99
COL4A1P02462 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
COL4A1P02462 RPL31P45-201ENST00000419532 356 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms