Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC009159.1-201ENST00000618386 642 ntBASIC3.88□□□□□ -1.79
HLA-DQA2P01906 AL139089.1-201ENST00000620372 975 ntBASIC3.88□□□□□ -1.79
HLA-DQA2P01906 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQA2P01906 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQA2P01906 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HLA-DQA2P01906 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DQA2P01906 LINC01109-201ENST00000603837 3081 ntBASIC3.88□□□□□ -1.79
HLA-DQA2P01906 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQA2P01906 AC125257.1-201ENST00000560400 2930 ntBASIC3.88□□□□□ -1.79
HLA-DQA2P01906 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 U8.3-201ENST00000363321 132 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 RNA5SP28-201ENST00000363841 119 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 SNORD113.2-201ENST00000364166 89 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 RNU6-259P-201ENST00000383999 107 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 RNA5SP87-201ENST00000384155 118 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 Y_RNA.516-201ENST00000384541 124 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 RN7SKP33-201ENST00000410942 340 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 RBMY1KP-201ENST00000423480 476 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 EIF1P3-201ENST00000423841 334 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC011998.1-201ENST00000433403 117 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AL772161.1-201ENST00000439130 476 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 PPIAP3-201ENST00000450588 505 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AP1S2P1-201ENST00000457344 379 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 RN7SL610P-201ENST00000463845 291 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 SRRM1P2-201ENST00000464531 1192 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 ST13P14-201ENST00000474095 734 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC012170.1-201ENST00000495139 359 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AP000907.2-201ENST00000530827 353 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC126177.3-201ENST00000551839 688 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 SETP7-201ENST00000552169 453 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 MIR4480-201ENST00000582492 71 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC087241.4-201ENST00000612441 480 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC006338.2-201ENST00000616864 791 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC019278.1-201ENST00000623516 479 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AL359740.1-201ENST00000624340 592 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 AC074029.4-201ENST00000624796 1859 ntBASIC3.87□□□□□ -1.79
HLA-DQA2P01906 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DQA2P01906 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AC027287.1-201ENST00000553115 1453 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 RNA5SP175-201ENST00000364275 119 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 MIR3065-201ENST00000390137 79 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 U3.20-201ENST00000390909 217 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AL583834.1-201ENST00000406943 343 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 RNU6-648P-201ENST00000410190 107 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 C1DP2-201ENST00000418167 426 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AC092832.1-201ENST00000422934 400 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 USP9YP36-201ENST00000424581 829 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 RPS3AP44-201ENST00000425466 790 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 UBE2V1P13-201ENST00000436983 439 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 HLA-N-201ENST00000437516 135 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AC073614.1-201ENST00000438690 650 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AC114495.1-201ENST00000441274 436 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 ABCF2P2-201ENST00000450549 296 ntBASIC3.86□□□□□ -1.79
HLA-DQA2P01906 AC098824.1-201ENST00000453565 980 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms