Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.44□□□□□ -2.02
TNFP01375 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFP01375 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFP01375 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TNFP01375 RPL39P40-201ENST00000445481 146 ntBASIC2.44□□□□□ -2.02
TNFP01375 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TNFP01375 RPL21P104-201ENST00000464143 478 ntBASIC2.44□□□□□ -2.02
TNFP01375 AC021205.1-201ENST00000468797 348 ntBASIC2.44□□□□□ -2.02
TNFP01375 AC104687.1-201ENST00000485829 412 ntBASIC2.44□□□□□ -2.02
TNFP01375 RNU6-56P-201ENST00000516986 93 ntBASIC2.44□□□□□ -2.02
TNFP01375 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.44□□□□□ -2.02
TNFP01375 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.44□□□□□ -2.02
TNFP01375 AC091544.4-201ENST00000555268 342 ntBASIC2.44□□□□□ -2.02
TNFP01375 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.44□□□□□ -2.02
TNFP01375 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFP01375 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.44□□□□□ -2.02
TNFP01375 AC079089.3-201ENST00000603094 673 ntBASIC2.44□□□□□ -2.02
TNFP01375 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.44□□□□□ -2.02
TNFP01375 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
TNFP01375 AC103988.1-201ENST00000566382 2177 ntBASIC2.44□□□□□ -2.02
TNFP01375 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFP01375 MTND5P3-201ENST00000438536 1800 ntBASIC2.44□□□□□ -2.02
TNFP01375 Z82195.2-201ENST00000612348 18351 ntBASIC2.44□□□□□ -2.02
TNFP01375 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TNFP01375 RNA5SP456-201ENST00000364002 114 ntBASIC2.43□□□□□ -2.02
TNFP01375 SNORA51.2-201ENST00000364595 132 ntBASIC2.43□□□□□ -2.02
TNFP01375 XGY1-201ENST00000381172 446 ntBASIC2.43□□□□□ -2.02
TNFP01375 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
TNFP01375 AL359511.1-201ENST00000402970 211 ntBASIC2.43□□□□□ -2.02
TNFP01375 AL513175.2-201ENST00000422071 443 ntBASIC2.43□□□□□ -2.02
TNFP01375 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.43□□□□□ -2.02
TNFP01375 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.43□□□□□ -2.02
TNFP01375 RN7SL636P-201ENST00000497504 294 ntBASIC2.43□□□□□ -2.02
TNFP01375 RPL23AP55-201ENST00000498163 452 ntBASIC2.43□□□□□ -2.02
TNFP01375 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.43□□□□□ -2.02
TNFP01375 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.43□□□□□ -2.02
TNFP01375 KLHL2P1-201ENST00000508691 521 ntBASIC2.43□□□□□ -2.02
TNFP01375 AC093755.1-201ENST00000512950 1023 ntBASIC2.43□□□□□ -2.02
TNFP01375 RNA5SP76-201ENST00000516277 87 ntBASIC2.43□□□□□ -2.02
TNFP01375 RNA5SP24-201ENST00000516478 95 ntBASIC2.43□□□□□ -2.02
TNFP01375 AC104986.1-201ENST00000517978 436 ntBASIC2.43□□□□□ -2.02
TNFP01375 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.43□□□□□ -2.02
TNFP01375 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.43□□□□□ -2.02
TNFP01375 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.43□□□□□ -2.02
TNFP01375 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TNFP01375 AL512310.1-201ENST00000548639 172 ntBASIC2.43□□□□□ -2.02
TNFP01375 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.43□□□□□ -2.02
TNFP01375 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.43□□□□□ -2.02
TNFP01375 MIR3945-201ENST00000581853 98 ntBASIC2.43□□□□□ -2.02
TNFP01375 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.43□□□□□ -2.02
TNFP01375 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.43□□□□□ -2.02
TNFP01375 AC019131.2-201ENST00000609071 870 ntBASIC2.43□□□□□ -2.02
TNFP01375 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TNFP01375 uc_338.9-201ENST00000617424 182 ntBASIC2.43□□□□□ -2.02
TNFP01375 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.43□□□□□ -2.02
TNFP01375 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.43□□□□□ -2.02
TNFP01375 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TNFP01375 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
TNFP01375 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFP01375 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TNFP01375 MT-TP-201ENST00000387461 68 ntBASIC2.42□□□□□ -2.02
TNFP01375 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
TNFP01375 SEPT7P2-202ENST00000398921 823 ntBASIC2.42□□□□□ -2.02
TNFP01375 RPS4XP7-201ENST00000406274 780 ntBASIC2.42□□□□□ -2.02
TNFP01375 AC105402.1-201ENST00000413336 545 ntBASIC2.42□□□□□ -2.02
TNFP01375 RPL7P10-201ENST00000417407 739 ntBASIC2.42□□□□□ -2.02
TNFP01375 MTCO1P39-201ENST00000426148 480 ntBASIC2.42□□□□□ -2.02
TNFP01375 FCF1P1-201ENST00000432690 571 ntBASIC2.42□□□□□ -2.02
TNFP01375 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFP01375 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TNFP01375 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.42□□□□□ -2.02
TNFP01375 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFP01375 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFP01375 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.42□□□□□ -2.02
TNFP01375 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.42□□□□□ -2.02
TNFP01375 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFP01375 AC007938.3-201ENST00000604965 623 ntBASIC2.42□□□□□ -2.02
TNFP01375 AC006023.2-201ENST00000609916 167 ntBASIC2.42□□□□□ -2.02
TNFP01375 AC064859.1-201ENST00000624741 174 ntBASIC2.42□□□□□ -2.02
TNFP01375 AC116563.2-201ENST00000624751 535 ntBASIC2.42□□□□□ -2.02
TNFP01375 MIR6733-201ENST00000635723 61 ntBASIC2.42□□□□□ -2.02
TNFP01375 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.42□□□□□ -2.02
TNFP01375 AC116096.1-201ENST00000566804 2314 ntBASIC2.42□□□□□ -2.02
TNFP01375 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TNFP01375 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
TNFP01375 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFP01375 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TNFP01375 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TNFP01375 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFP01375 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TNFP01375 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TNFP01375 RNA5SP289-201ENST00000362332 137 ntBASIC2.41□□□□□ -2.02
TNFP01375 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFP01375 NANOGP5-201ENST00000424456 877 ntBASIC2.41□□□□□ -2.02
TNFP01375 AC109583.1-201ENST00000432156 268 ntBASIC2.41□□□□□ -2.02
TNFP01375 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.41□□□□□ -2.02
TNFP01375 RN7SL297P-201ENST00000483161 293 ntBASIC2.41□□□□□ -2.02
TNFP01375 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.41□□□□□ -2.02
TNFP01375 RNU4-60P-201ENST00000517239 135 ntBASIC2.41□□□□□ -2.02
TNFP01375 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms