Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CPSF4O95639 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CPSF4O95639 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CPSF4O95639 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.46□□□□□ -2.02
CPSF4O95639 RNU6-792P-201ENST00000363490 107 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CPSF4O95639 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CPSF4O95639 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.46□□□□□ -2.02
CPSF4O95639 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.46□□□□□ -2.02
CPSF4O95639 KRR1P1-201ENST00000419430 803 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AC073310.1-201ENST00000423226 1033 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 DPPA2P1-201ENST00000428060 556 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AL590762.3-201ENST00000436372 640 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AC011816.1-201ENST00000441346 546 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.46□□□□□ -2.02
CPSF4O95639 NPM1P49-201ENST00000448027 714 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.46□□□□□ -2.02
CPSF4O95639 AL353718.1-201ENST00000451028 517 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.46□□□□□ -2.02
CPSF4O95639 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.46□□□□□ -2.02
CPSF4O95639 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.46□□□□□ -2.02
CPSF4O95639 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.46□□□□□ -2.02
CPSF4O95639 HMGB3P15-201ENST00000507326 574 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.46□□□□□ -2.02
CPSF4O95639 AC025768.1-201ENST00000510057 267 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AC005351.1-201ENST00000511152 786 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.46□□□□□ -2.02
CPSF4O95639 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CPSF4O95639 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AL442163.2-201ENST00000553912 710 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.46□□□□□ -2.02
CPSF4O95639 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.46□□□□□ -2.02
CPSF4O95639 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.46□□□□□ -2.02
CPSF4O95639 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.46□□□□□ -2.02
CPSF4O95639 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.46□□□□□ -2.02
CPSF4O95639 AC093732.2-201ENST00000607950 274 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AC048347.1-201ENST00000624621 427 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AL137790.1-201ENST00000634283 177 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 AL590396.2-201ENST00000636511 1041 ntBASIC2.46□□□□□ -2.02
CPSF4O95639 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CPSF4O95639 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.46□□□□□ -2.02
CPSF4O95639 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CPSF4O95639 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CPSF4O95639 AL355578.1-201ENST00000607405 1328 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AC007256.1-201ENST00000392253 2765 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 FAM35CP-201ENST00000554755 2470 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CPSF4O95639 AL512646.1-201ENST00000269395 1077 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CPSF4O95639 RNU6-356P-201ENST00000384140 107 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 PRRC2CP1-201ENST00000404428 159 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AL031121.1-201ENST00000406553 254 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
CPSF4O95639 AL451062.2-201ENST00000427515 271 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 MTCO1P43-201ENST00000431831 488 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AL035407.2-201ENST00000454090 378 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 snoU13.7-201ENST00000459220 104 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.45□□□□□ -2.02
CPSF4O95639 AC005921.1-201ENST00000510589 286 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 RPL7L1P13-201ENST00000511702 739 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 RNA5SP367-201ENST00000516557 118 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CPSF4O95639 MTND2P26-201ENST00000528255 1029 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 OSBPL9P3-201ENST00000534523 595 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.45□□□□□ -2.02
CPSF4O95639 AC128657.1-201ENST00000549459 145 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.45□□□□□ -2.02
CPSF4O95639 AC104229.1-201ENST00000561364 255 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.45□□□□□ -2.02
CPSF4O95639 AC106734.1-201ENST00000568646 663 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AC090312.2-201ENST00000582687 378 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AC112503.1-201ENST00000608436 391 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AL392048.1-201ENST00000613946 534 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 RMST_10.1-201ENST00000616309 154 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AC073569.3-201ENST00000619055 682 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AP003400.6-201ENST00000624698 740 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 AC091948.2-201ENST00000636510 279 ntBASIC2.45□□□□□ -2.02
CPSF4O95639 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CPSF4O95639 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
CPSF4O95639 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CPSF4O95639 MFSD8-213ENST00000641134 1327 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.44□□□□□ -2.02
CPSF4O95639 SEC63P2-201ENST00000503863 1939 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 ZNF33CP-201ENST00000432492 2030 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CPSF4O95639 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CPSF4O95639 AC016716.1-201ENST00000265882 708 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 RNA5SP189-201ENST00000364920 115 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 U8.9-201ENST00000365667 134 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 DEFA7P-201ENST00000382676 285 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 MIR591-201ENST00000385290 95 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CPSF4O95639 MIR887-201ENST00000401258 79 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 RNU4-27P-201ENST00000410889 139 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 RPLP0P7-201ENST00000416050 667 ntBASIC2.44□□□□□ -2.02
CPSF4O95639 NUP35P2-201ENST00000416748 943 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms