Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 AC116096.1-201ENST00000566804 2314 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
FOXN1O15353 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
FOXN1O15353 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXN1O15353 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
FOXN1O15353 PRO1804-201ENST00000623780 2050 ntBASIC4.9□□□□□ -1.62
FOXN1O15353 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
FOXN1O15353 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
FOXN1O15353 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
FOXN1O15353 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXN1O15353 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
FOXN1O15353 Y_RNA.453-201ENST00000384223 109 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 Y_RNA.535-201ENST00000384612 99 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 MT-TL1-201ENST00000386347 75 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 RNU6-575P-201ENST00000411326 105 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.9□□□□□ -1.63
FOXN1O15353 AL691449.1-201ENST00000426570 421 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.9□□□□□ -1.63
FOXN1O15353 AC073335.1-201ENST00000427776 363 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 NPM1P24-201ENST00000428039 894 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXN1O15353 AC073614.1-201ENST00000438690 650 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXN1O15353 MTND5P14-201ENST00000441481 1267 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.9□□□□□ -1.63
FOXN1O15353 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
FOXN1O15353 AC105252.1-201ENST00000503089 286 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXN1O15353 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXN1O15353 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXN1O15353 AC108120.2-201ENST00000512973 294 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXN1O15353 IGHV3-32-201ENST00000519182 355 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.9□□□□□ -1.63
FOXN1O15353 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.9□□□□□ -1.63
FOXN1O15353 SEPT7P9-203ENST00000604116 343 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AP005137.2-201ENST00000609238 400 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AL031666.3-201ENST00000609320 1006 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AC011472.4-201ENST00000615848 491 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AC002553.4-201ENST00000616896 331 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AL136221.1-201ENST00000621449 509 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 FP236240.3-201ENST00000623061 327 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 AL359757.2-201ENST00000624309 274 ntBASIC4.9□□□□□ -1.63
FOXN1O15353 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXN1O15353 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXN1O15353 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.9□□□□□ -1.63
FOXN1O15353 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
FOXN1O15353 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
FOXN1O15353 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN1O15353 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN1O15353 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
FOXN1O15353 AP002001.2-201ENST00000529025 1469 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN1O15353 RNU6-374P-201ENST00000364146 108 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 Y_RNA.311-201ENST00000365068 96 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 RNU6-1009P-201ENST00000390996 107 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 CCNG1P1-201ENST00000406783 885 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXN1O15353 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN1O15353 USP9YP36-201ENST00000424581 829 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 AC233728.2-201ENST00000425348 757 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 HSPD1P21-201ENST00000436541 245 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 RPL12P46-201ENST00000436610 195 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 AC002542.1-201ENST00000440683 193 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN1O15353 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN1O15353 AC023512.1-201ENST00000444513 499 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 DPPA3P1-201ENST00000448050 469 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 RFC5P1-201ENST00000454419 874 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 PNPLA4P1-201ENST00000458328 305 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 RN7SL809P-201ENST00000482040 297 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 RN7SL812P-201ENST00000493791 279 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 RPL7P23-201ENST00000493874 747 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.89□□□□□ -1.63
FOXN1O15353 PPBPP1-201ENST00000510807 373 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 MTND3P22-201ENST00000510932 243 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 IGHV3-63-201ENST00000518422 341 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXN1O15353 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.89□□□□□ -1.63
FOXN1O15353 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.89□□□□□ -1.63
FOXN1O15353 AC006960.3-201ENST00000561845 705 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN1O15353 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.89□□□□□ -1.63
FOXN1O15353 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN1O15353 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN1O15353 CASC19-280ENST00000642102 1351 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
FOXN1O15353 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
FOXN1O15353 USP9YP4-201ENST00000424401 1745 ntBASIC4.89□□□□□ -1.63
FOXN1O15353 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
FOXN1O15353 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
FOXN1O15353 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
FOXN1O15353 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.88□□□□□ -1.63
FOXN1O15353 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
FOXN1O15353 Y_RNA.9-201ENST00000362354 101 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms