Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC245054.2-201ENST00000415639 319 ntBASIC4.53□□□□□ -1.68
CUX2O14529 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CUX2O14529 AC023512.1-201ENST00000444513 499 ntBASIC4.53□□□□□ -1.68
CUX2O14529 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CUX2O14529 SRIP1-201ENST00000489235 288 ntBASIC4.53□□□□□ -1.68
CUX2O14529 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CUX2O14529 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CUX2O14529 Y_RNA.670-201ENST00000516255 105 ntBASIC4.53□□□□□ -1.68
CUX2O14529 FAM60DP-201ENST00000524174 632 ntBASIC4.53□□□□□ -1.68
CUX2O14529 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CUX2O14529 AC074029.1-201ENST00000552531 1044 ntBASIC4.53□□□□□ -1.68
CUX2O14529 MIR7153-201ENST00000637758 57 ntBASIC4.53□□□□□ -1.68
CUX2O14529 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CUX2O14529 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CUX2O14529 SNORD114-30-201ENST00000364448 72 ntBASIC4.52□□□□□ -1.69
CUX2O14529 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.52□□□□□ -1.69
CUX2O14529 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CUX2O14529 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.52□□□□□ -1.69
CUX2O14529 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.52□□□□□ -1.69
CUX2O14529 OR4G11P-201ENST00000492842 939 ntBASIC4.52□□□□□ -1.69
CUX2O14529 AC107222.1-201ENST00000510899 637 ntBASIC4.52□□□□□ -1.69
CUX2O14529 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.52□□□□□ -1.69
CUX2O14529 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.52□□□□□ -1.69
CUX2O14529 AC243972.3-201ENST00000539655 198 ntBASIC4.52□□□□□ -1.69
CUX2O14529 AL391156.1-201ENST00000554965 554 ntBASIC4.52□□□□□ -1.69
CUX2O14529 MTCYBP28-201ENST00000566728 1132 ntBASIC4.52□□□□□ -1.69
CUX2O14529 KATNBL1P1-201ENST00000605192 748 ntBASIC4.52□□□□□ -1.69
CUX2O14529 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.52□□□□□ -1.69
CUX2O14529 AP000526.1-201ENST00000603308 1388 ntBASIC4.52□□□□□ -1.69
CUX2O14529 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CUX2O14529 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CUX2O14529 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.52□□□□□ -1.69
CUX2O14529 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.51□□□□□ -1.69
CUX2O14529 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUX2O14529 SNORA68.2-201ENST00000391263 128 ntBASIC4.51□□□□□ -1.69
CUX2O14529 MTND2P21-201ENST00000436242 1042 ntBASIC4.51□□□□□ -1.69
CUX2O14529 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.51□□□□□ -1.69
CUX2O14529 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.51□□□□□ -1.69
CUX2O14529 OR5BN1P-201ENST00000532955 829 ntBASIC4.51□□□□□ -1.69
CUX2O14529 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.51□□□□□ -1.69
CUX2O14529 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.51□□□□□ -1.69
CUX2O14529 AL355493.4-201ENST00000618530 292 ntBASIC4.51□□□□□ -1.69
CUX2O14529 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUX2O14529 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUX2O14529 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUX2O14529 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUX2O14529 AC092593.1-201ENST00000515413 1815 ntBASIC4.51□□□□□ -1.69
CUX2O14529 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CUX2O14529 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CUX2O14529 RNU6-178P-201ENST00000384631 104 ntBASIC4.5□□□□□ -1.69
CUX2O14529 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CUX2O14529 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.5□□□□□ -1.69
CUX2O14529 TRIM60P13-201ENST00000432350 1283 ntBASIC4.5□□□□□ -1.69
CUX2O14529 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.5□□□□□ -1.69
CUX2O14529 RNU7-27P-201ENST00000459281 62 ntBASIC4.5□□□□□ -1.69
CUX2O14529 AC090543.1-201ENST00000492168 485 ntBASIC4.5□□□□□ -1.69
CUX2O14529 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.5□□□□□ -1.69
CUX2O14529 AC108157.1-201ENST00000510511 539 ntBASIC4.5□□□□□ -1.69
CUX2O14529 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.5□□□□□ -1.69
CUX2O14529 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.5□□□□□ -1.69
CUX2O14529 AC007423.1-201ENST00000605009 627 ntBASIC4.5□□□□□ -1.69
CUX2O14529 AC116447.1-201ENST00000613153 453 ntBASIC4.5□□□□□ -1.69
CUX2O14529 AL353743.4-201ENST00000422653 1547 ntBASIC4.5□□□□□ -1.69
CUX2O14529 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CUX2O14529 AL512646.1-201ENST00000269395 1077 ntBASIC4.49□□□□□ -1.69
CUX2O14529 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CUX2O14529 SNORD62.1-201ENST00000362541 86 ntBASIC4.49□□□□□ -1.69
CUX2O14529 RNU1-35P-201ENST00000362782 153 ntBASIC4.49□□□□□ -1.69
CUX2O14529 SNORA80E-201ENST00000384744 137 ntBASIC4.49□□□□□ -1.69
CUX2O14529 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.49□□□□□ -1.69
CUX2O14529 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.49□□□□□ -1.69
CUX2O14529 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.49□□□□□ -1.69
CUX2O14529 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.49□□□□□ -1.69
CUX2O14529 RPL9P6-201ENST00000492764 598 ntBASIC4.49□□□□□ -1.69
CUX2O14529 RN7SL636P-201ENST00000497504 294 ntBASIC4.49□□□□□ -1.69
CUX2O14529 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CUX2O14529 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.49□□□□□ -1.69
CUX2O14529 AC107918.3-201ENST00000533272 382 ntBASIC4.49□□□□□ -1.69
CUX2O14529 AC007424.1-203ENST00000554613 687 ntBASIC4.49□□□□□ -1.69
CUX2O14529 AC012414.2-201ENST00000559474 187 ntBASIC4.49□□□□□ -1.69
CUX2O14529 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.49□□□□□ -1.69
CUX2O14529 PSMA6P4-201ENST00000603247 718 ntBASIC4.49□□□□□ -1.69
CUX2O14529 U4.3-201ENST00000621047 82 ntBASIC4.49□□□□□ -1.69
CUX2O14529 AC009501.3-201ENST00000605001 1352 ntBASIC4.49□□□□□ -1.69
CUX2O14529 MIR148B-201ENST00000362252 99 ntBASIC4.49□□□□□ -1.69
CUX2O14529 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.49□□□□□ -1.69
CUX2O14529 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.49□□□□□ -1.69
CUX2O14529 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.49□□□□□ -1.69
CUX2O14529 AP001086.1-201ENST00000494882 321 ntBASIC4.49□□□□□ -1.69
CUX2O14529 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.49□□□□□ -1.69
CUX2O14529 RNU6-1308P-201ENST00000516817 103 ntBASIC4.49□□□□□ -1.69
CUX2O14529 HMGB1P46-201ENST00000520062 610 ntBASIC4.49□□□□□ -1.69
CUX2O14529 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.49□□□□□ -1.69
CUX2O14529 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.49□□□□□ -1.69
CUX2O14529 AL118508.4-201ENST00000624142 1176 ntBASIC4.49□□□□□ -1.69
CUX2O14529 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.49□□□□□ -1.69
CUX2O14529 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUX2O14529 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUX2O14529 RNY1P10-201ENST00000363268 113 ntBASIC4.48□□□□□ -1.69
CUX2O14529 RNU6-31P-201ENST00000384388 108 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 406.4 ms