Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SLC28A1O00337 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC28A1O00337 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC28A1O00337 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AC024224.1-201ENST00000538284 609 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC28A1O00337 RNU4-5P-201ENST00000607255 135 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 AC080013.4-201ENST00000607624 649 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 AL590240.3-201ENST00000621416 943 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC28A1O00337 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AL353746.1-201ENST00000566293 6881 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC28A1O00337 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC28A1O00337 AC106754.1-201ENST00000562632 1513 ntBASIC3.39□□□□□ -1.87
SLC28A1O00337 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC28A1O00337 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC28A1O00337 AL672296.1-201ENST00000427780 2158 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC28A1O00337 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC28A1O00337 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC28A1O00337 ERHP2-201ENST00000402323 299 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 RAB28P1-201ENST00000411517 641 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC28A1O00337 AC245052.5-201ENST00000416320 649 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC28A1O00337 AC106883.1-201ENST00000418805 562 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC28A1O00337 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC28A1O00337 NANOGP5-201ENST00000424456 877 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC28A1O00337 MTCO2P23-201ENST00000425216 680 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC092648.1-201ENST00000425870 423 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC28A1O00337 RPL7P2-201ENST00000427639 268 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AP000907.1-201ENST00000428428 510 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC28A1O00337 MTND2P5-201ENST00000432656 1006 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 USP9YP24-201ENST00000434374 697 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 USP9YP17-201ENST00000444617 696 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 TRGVB-201ENST00000453257 471 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC092155.2-201ENST00000454675 477 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 SUMO2P2-201ENST00000456482 255 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC010468.1-201ENST00000461022 817 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 RPL23AP67-201ENST00000465341 474 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC096751.1-202ENST00000502691 1067 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 TMEM251P1-201ENST00000503717 318 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC114981.1-201ENST00000503897 678 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC28A1O00337 HMGN1P11-201ENST00000508668 303 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC28A1O00337 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC28A1O00337 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC28A1O00337 NDUFB9P3-201ENST00000521269 501 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC28A1O00337 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC28A1O00337 AC023813.2-201ENST00000564321 469 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.38□□□□□ -1.87
SLC28A1O00337 AP001269.3-201ENST00000588718 329 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.38□□□□□ -1.87
SLC28A1O00337 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.38□□□□□ -1.87
SLC28A1O00337 BNIP3P11-201ENST00000603878 563 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC28A1O00337 AL360181.4-201ENST00000621752 134 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 AC004009.2-201ENST00000623016 728 ntBASIC3.38□□□□□ -1.87
SLC28A1O00337 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC28A1O00337 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
SLC28A1O00337 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SLC28A1O00337 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC28A1O00337 FRG1CP-201ENST00000358464 769 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC28A1O00337 DEFB109C-201ENST00000382575 264 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 DEFB109B-201ENST00000382656 264 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 CYCSP45-201ENST00000402289 315 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AP000567.1-201ENST00000406413 156 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 RPS15AP6-201ENST00000420703 385 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC28A1O00337 DUTP6-201ENST00000425573 462 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 USP9YP11-201ENST00000427537 717 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 MTND4P6-201ENST00000438297 472 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 RRM2P4-201ENST00000441721 562 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC28A1O00337 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC28A1O00337 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.37□□□□□ -1.87
SLC28A1O00337 AC010401.1-201ENST00000463867 348 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 ST13P14-201ENST00000474095 734 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 RPS4XP22-201ENST00000480755 780 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC28A1O00337 AC134050.1-201ENST00000495088 933 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 MTCYBP17-201ENST00000503579 789 ntBASIC3.37□□□□□ -1.87
SLC28A1O00337 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC28A1O00337 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms