Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MIR622-201ENST00000638396 96 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 AC092593.1-201ENST00000515413 1815 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 ZNF720P1-201ENST00000562403 1939 ntBASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHKB-CPT1BH3BT56 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 OR5BR1P-201ENST00000524992 1330 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AL137003.2-201ENST00000606924 2538 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 SPRR2C-201ENST00000290702 219 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 OR5H2-201ENST00000355273 945 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORA9-201ENST00000384215 133 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR105-2-201ENST00000385083 81 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 RPS4XP9-201ENST00000405151 780 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 SNORD23.1-201ENST00000408212 104 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC099535.1-201ENST00000408928 371 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU6-193P-201ENST00000410977 107 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 MTCO3P12-201ENST00000416718 547 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 COTL1P1-201ENST00000422309 375 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 RPL7P2-201ENST00000427639 268 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AL117339.2-201ENST00000430475 180 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC009296.1-201ENST00000443146 155 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 HMGB1P48-201ENST00000446155 598 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC097493.1-201ENST00000463958 372 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 RPL27AP5-201ENST00000469428 449 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC079804.2-201ENST00000490376 200 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC021678.1-201ENST00000505195 936 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 ATG10-208ENST00000513634 618 ntTSL 2 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC133963.2-201ENST00000513686 578 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 OR5BN1P-201ENST00000532955 829 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC090666.1-201ENST00000578241 445 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR4286-201ENST00000580651 93 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC123912.3-201ENST00000600907 1367 ntBASIC1.41□□□□□ -2.18
CHKB-CPT1BH3BT56 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CHKB-CPT1BH3BT56 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC1.4□□□□□ -2.18
CHKB-CPT1BH3BT56 MTND4P35-201ENST00000604257 1375 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU4-39P-201ENST00000362455 127 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 SNORD114-30-201ENST00000364448 72 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU1-100P-201ENST00000365255 165 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 RNU6-398P-201ENST00000384143 109 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AL162578.1-201ENST00000406202 378 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 HMGB3P2-201ENST00000411913 584 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 BX323014.1-201ENST00000412876 237 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 ARL2BPP3-201ENST00000421226 480 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 CEACAMP9-201ENST00000442990 513 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC114755.5-201ENST00000447760 831 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AL359385.1-201ENST00000456509 365 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 RN7SL863P-201ENST00000462370 296 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 PLGLA-201ENST00000465668 449 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 RPL31P41-201ENST00000477967 372 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 RN7SL741P-201ENST00000482473 289 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC090453.1-201ENST00000495560 436 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC108120.2-201ENST00000512973 294 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC034244.2-201ENST00000514668 858 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 RN7SKP122-201ENST00000515923 296 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 RGS5-218ENST00000526176 574 ntTSL 4 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC011611.1-201ENST00000552179 197 ntBASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.4□□□□□ -2.19
CHKB-CPT1BH3BT56 MIR5685-201ENST00000579080 79 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms