Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC108467.2-201ENST00000617640 1597 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 Y_RNA.450-201ENST00000384198 113 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 RNU1-82P-201ENST00000390851 165 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 CALM2P3-201ENST00000400429 449 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AL357515.1-201ENST00000402967 542 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AL080315.1-201ENST00000406055 466 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC073464.1-201ENST00000429823 534 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AL596276.1-201ENST00000434465 418 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 MTND4LP10-201ENST00000435146 291 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 RPL23AP33-201ENST00000442301 452 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 USP9YP15-201ENST00000442391 422 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 SLC25A51P1-201ENST00000468432 871 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 ARL4AP2-201ENST00000507378 601 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 RNU1-6P-201ENST00000516290 144 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AP003034.1-201ENST00000534621 422 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 RN7SL703P-201ENST00000578485 302 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 MIR3146-201ENST00000580367 79 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC068790.5-201ENST00000602741 355 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC017083.3-201ENST00000609955 700 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AL590282.1-201ENST00000610379 1136 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AL590099.1-201ENST00000615276 138 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 AC007014.2-201ENST00000615581 479 ntBASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 Y_RNA.372-201ENST00000365599 102 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 Y_RNA.493-201ENST00000384422 102 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 MIR153-1-201ENST00000384914 90 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AL590704.1-201ENST00000402856 794 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 CCNG1P1-201ENST00000406783 885 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 Y_RNA.604-201ENST00000410574 102 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC233728.2-201ENST00000425348 757 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 MTND4P18-201ENST00000447010 465 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 Z99127.3-201ENST00000448158 395 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AL500522.2-201ENST00000448562 343 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 FABP3P2-201ENST00000453169 399 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 MTND2P24-201ENST00000453434 806 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC053481.1-201ENST00000467217 306 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 RPS3AP14-201ENST00000483907 780 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 RPL35P6-201ENST00000490024 372 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC010587.1-201ENST00000505809 469 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC022360.1-201ENST00000521058 340 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AL049839.1-201ENST00000556151 657 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 HMGB1P33-201ENST00000563485 527 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 RPL7P50-201ENST00000600588 727 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AP002360.4-201ENST00000606980 481 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 OR6R2P-201ENST00000609216 300 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 uc_338.12-201ENST00000616344 181 ntBASIC5.29□□□□□ -1.56
CCDC85CA6NKD9 AC009268.2-201ENST00000621925 457 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms