Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MIR23B-201ENST00000384832 97 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 U3.29-201ENST00000391296 212 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 U3.42-201ENST00000408746 214 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 RNA5SP38-201ENST00000410750 119 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 RNA5SP229-201ENST00000410809 99 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AL445183.3-201ENST00000414168 502 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AL606495.1-201ENST00000422100 813 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC079780.1-201ENST00000428259 207 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 MUPP-201ENST00000438111 566 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 CDC42P1-201ENST00000456658 548 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 MTCO3P2-201ENST00000457365 171 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 snoU109.4-201ENST00000458953 143 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 SNORA84-201ENST00000459229 133 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 RPS27AP9-201ENST00000477681 438 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 GMPSP1-201ENST00000514075 579 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 RNU6-1102P-201ENST00000516149 96 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC007991.1-201ENST00000522680 631 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 EEF1B2P4-201ENST00000551398 348 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC006130.2-201ENST00000586202 326 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC020658.4-201ENST00000613987 684 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AC003001.2-201ENST00000616294 831 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 AL353748.2-201ENST00000622148 471 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 CR392039.5-201ENST00000623201 510 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 NUP58P1-201ENST00000502546 1738 ntBASIC2.5□□□□□ -2.01
RBFOX3A6NFN3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 RNU6-115P-201ENST00000364310 107 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 SNORD82-201ENST00000365530 70 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 SAR1AP4-201ENST00000429225 591 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 RPL21P2-201ENST00000440049 481 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 MTND2P30-201ENST00000456663 382 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 RN7SL542P-201ENST00000467147 294 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 ACTR3P3-201ENST00000480448 893 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 ARL4AP2-201ENST00000507378 601 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AC111000.2-201ENST00000507775 550 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 KLHL2P1-201ENST00000508691 521 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 FCF1P8-201ENST00000510322 597 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 PAICSP4-201ENST00000517543 1253 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 HMGB1P1-201ENST00000522557 636 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 NIFKP8-201ENST00000560500 874 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AC010653.1-201ENST00000571108 881 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AC078899.3-201ENST00000599065 212 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AC055876.5-201ENST00000605667 259 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 U3.45-201ENST00000607547 219 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AL359198.2-201ENST00000611836 194 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 AC106730.3-201ENST00000624568 641 ntBASIC2.49□□□□□ -2.01
RBFOX3A6NFN3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 CUL1P1-201ENST00000509510 2425 ntBASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 AL357075.1-201ENST00000404107 726 ntBASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 AL139098.1-201ENST00000407291 389 ntBASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 RN7SKP111-201ENST00000410349 271 ntBASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 RPS15AP38-201ENST00000413110 372 ntBASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 RPL31P54-201ENST00000429803 370 ntBASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 AC018644.1-201ENST00000429934 551 ntBASIC2.48□□□□□ -2.01
RBFOX3A6NFN3 AL445584.1-201ENST00000431451 330 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms