Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 RNU6-660P-201ENST00000364566 109 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 U3.22-201ENST00000391120 215 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 RNA5SP239-201ENST00000410218 129 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 RN7SKP266-201ENST00000410232 287 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 RNU6-712P-201ENST00000410558 100 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 RPS7P15-201ENST00000415804 584 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 MTND4LP10-201ENST00000435146 291 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 Z74696.2-201ENST00000436514 498 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 LSM1P1-201ENST00000438629 273 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 SNORA71B-202ENST00000439232 272 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL831737.1-201ENST00000441288 271 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL353691.1-201ENST00000451332 387 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 RPS23P7-201ENST00000466210 444 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC106872.3-201ENST00000495104 446 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 POU5F1P7-201ENST00000508759 541 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC034159.1-201ENST00000513885 583 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC093677.1-201ENST00000514414 678 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AP003730.1-201ENST00000524605 285 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AP004371.1-201ENST00000525240 214 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC068587.4-201ENST00000533893 186 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL121603.1-201ENST00000553815 142 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 MIR4330-201ENST00000579077 105 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL353997.4-201ENST00000586196 166 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC234771.5-201ENST00000600161 514 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC121247.2-201ENST00000604776 136 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC004853.1-201ENST00000604902 698 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC079684.1-201ENST00000621405 437 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC011944.2-201ENST00000624440 683 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC138649.5-201ENST00000637456 137 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL445523.1-201ENST00000451184 1362 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC012618.3-205ENST00000637896 1496 ntBASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRBV5-5A0A0J9YX44 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL049780.3-201ENST00000624612 1583 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 SNORA58B-201ENST00000364259 136 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 RNA5SP167-201ENST00000365461 116 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 RNU6-744P-201ENST00000365557 107 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 RNU6-1316P-201ENST00000384242 108 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC007066.1-201ENST00000392902 381 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 RPS3AP26-201ENST00000398259 784 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL031577.2-201ENST00000404133 280 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 RNU6-920P-201ENST00000410926 92 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 RPS6P12-201ENST00000432491 726 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC097262.1-201ENST00000452559 548 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 RPS3AP43-201ENST00000479743 781 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC078918.1-201ENST00000498515 228 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC112198.1-201ENST00000505369 1220 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC087373.1-201ENST00000524920 491 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC126177.3-201ENST00000551839 688 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 AP001004.1-201ENST00000582468 324 ntBASIC3.31□□□□□ -1.88
TRBV5-5A0A0J9YX44 KLKP1-201ENST00000595979 403 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms