Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A3BPQ9Y5P4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU6-173P-201ENST00000364215 104 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU1-63P-201ENST00000383902 164 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU6-637P-201ENST00000384050 107 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 Y_RNA.436-201ENST00000384097 102 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 MIR135A2-201ENST00000384854 100 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RNA5SP372-201ENST00000390836 115 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 FCF1P10-201ENST00000407590 479 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU4-25P-201ENST00000410569 230 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC009237.10-201ENST00000414112 510 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 USP9YP13-201ENST00000417797 480 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 TOMM22P1-201ENST00000418578 312 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RPS6P12-201ENST00000432491 726 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 MTCO1P19-201ENST00000443487 500 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 TPT1P12-201ENST00000448968 492 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 MTND1P27-201ENST00000451117 902 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AL033528.1-201ENST00000453780 140 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 SNRPGP5-201ENST00000456003 220 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC005008.1-201ENST00000456151 612 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL23AP24-201ENST00000458203 385 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RPS23P7-201ENST00000466210 444 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC011276.1-201ENST00000469688 323 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC026979.1-201ENST00000492525 396 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC096751.1-202ENST00000502691 1067 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 CBX3P3-201ENST00000508108 532 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC021146.1-201ENST00000511202 716 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC093840.1-201ENST00000511599 336 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC021146.3-201ENST00000511911 260 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 MTND3P5-201ENST00000512798 333 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU6-1073P-201ENST00000517182 106 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 SLC25A36P1-201ENST00000590111 465 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC090181.2-201ENST00000602975 672 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AL139286.1-201ENST00000604465 483 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AP002360.3-201ENST00000607673 710 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AC009159.1-201ENST00000618386 642 ntBASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A3BPQ9Y5P4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 Y_RNA.318-201ENST00000365131 97 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU6-882P-201ENST00000391025 103 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU6-516P-201ENST00000411381 104 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 TMSB10P2-201ENST00000416049 131 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 OR4K11P-201ENST00000431829 904 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AL353706.1-201ENST00000436728 494 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC092641.1-201ENST00000440229 772 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 RAC1P7-201ENST00000445367 377 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 RPL23AP2-201ENST00000471227 466 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 RN7SL41P-201ENST00000476144 297 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 KLHL2P1-201ENST00000508691 521 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 RNU6-798P-201ENST00000516912 103 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC090151.1-201ENST00000520784 730 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 COX6CP3-201ENST00000580869 223 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AP001429.1-201ENST00000602568 530 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC121334.2-201ENST00000605387 271 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC020634.1-201ENST00000608701 549 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 HULC.1-201ENST00000612720 240 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC010678.1-201ENST00000614118 713 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AL360181.4-201ENST00000621752 134 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AL353748.2-201ENST00000622148 471 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 AL603839.4-201ENST00000624658 1005 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 MIR4275-201ENST00000636486 87 ntBASIC4.97□□□□□ -1.61
COL4A3BPQ9Y5P4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms