Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 MTCYBP5-201ENST00000423752 1135 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AL353777.1-201ENST00000425552 326 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 TPT1P13-201ENST00000449760 499 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC004924.1-201ENST00000480160 781 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC006390.1-201ENST00000508068 283 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 RNU6-506P-201ENST00000516553 94 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 CDH12P4-201ENST00000517835 295 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 CDH12P3-201ENST00000517935 295 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 CDH12P1-201ENST00000518435 295 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 CENPUP2-201ENST00000555897 1186 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC034268.2-201ENST00000571784 482 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 HMGN1P30-201ENST00000589286 268 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 CKS1BP3-201ENST00000600888 237 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC011468.4-201ENST00000603942 409 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 RBM11P1-201ENST00000604951 799 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AP003117.2-201ENST00000606010 545 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC007684.1-201ENST00000609671 477 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC068944.2-201ENST00000610373 403 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AL136295.6-201ENST00000610486 658 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC091304.9-201ENST00000612091 226 ntBASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDHA3Q9Y5H8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 U8.3-201ENST00000363321 132 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 RHOT1P2-201ENST00000366423 333 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 RNU6-1207P-201ENST00000384343 107 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 MIR513A2-201ENST00000385249 127 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AL121834.1-202ENST00000404494 277 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 MIR1250-201ENST00000408098 113 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 SPA17P1-201ENST00000416656 452 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC108734.1-201ENST00000439549 399 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 MTCO2P3-201ENST00000442543 421 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AL162591.2-201ENST00000449634 317 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 RPS20P32-201ENST00000456044 356 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 RPL5P30-201ENST00000465511 891 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 COX7A2P2-201ENST00000505291 250 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC022483.1-201ENST00000514020 567 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 RN7SKP244-201ENST00000516513 307 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 RNU2-46P-201ENST00000517038 113 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 IFITM8P-201ENST00000522529 394 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AL352979.3-201ENST00000553515 247 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 SETP2-201ENST00000553886 926 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC006960.3-201ENST00000561845 705 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 NRBF2P1-201ENST00000587407 859 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 VN1R79P-201ENST00000593540 513 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AL139395.1-201ENST00000603662 160 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC079587.1-201ENST00000603846 277 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 MIR432-201ENST00000606207 94 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 OR10AB1P-201ENST00000609613 938 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC105429.2-201ENST00000610567 517 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC009159.1-201ENST00000618386 642 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC136475.10-201ENST00000620253 385 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC073534.2-201ENST00000620377 381 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AC091953.3-201ENST00000623220 236 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 SEPT14P19-203ENST00000633205 211 ntBASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms