Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 Y_RNA.552-201ENST00000384665 112 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC099677.1-201ENST00000420575 175 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AL391219.1-201ENST00000422570 483 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AL354766.1-201ENST00000423396 542 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 UBE2V1P4-201ENST00000425374 344 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 PSMA2P3-201ENST00000429685 675 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 RHOT1P3-201ENST00000436571 331 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 KRT8P51-201ENST00000438938 274 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 FTLP8-201ENST00000446770 267 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC008264.1-201ENST00000447612 367 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 RPL37P6-201ENST00000460682 294 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 HMGB1P25-201ENST00000468402 607 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC087884.1-201ENST00000469738 328 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 TRBV5-2-201ENST00000489095 273 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC009901.1-201ENST00000506703 541 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC107222.1-201ENST00000510899 637 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SKP70-201ENST00000516655 271 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC025423.5-201ENST00000550230 219 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC107871.2-201ENST00000612894 502 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 uc_338.29-201ENST00000615099 168 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AL512652.1-201ENST00000619006 500 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 FAM27E2-201ENST00000619668 403 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 RBMY1HP-201ENST00000382759 1389 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 PABPC1P7-201ENST00000413177 1513 ntBASIC5.79□□□□□ -1.48
PCDHGA11Q9Y5H2 AC004656.1-201ENST00000568479 4951 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 OR9K1P-202ENST00000641111 3217 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 EIF2AP4-201ENST00000424793 1781 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-450P-201ENST00000364654 107 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-146P-201ENST00000384602 108 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL137014.1-201ENST00000420490 1226 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 FAM183DP-201ENST00000421987 399 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC096775.1-201ENST00000437724 448 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 OSTCP8-201ENST00000445117 448 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC097463.1-201ENST00000447288 481 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 PCNPP5-201ENST00000452246 481 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC002553.2-201ENST00000453217 340 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 SDC4P-201ENST00000453285 601 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 PPIAP7-201ENST00000454070 489 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 VN1R105P-201ENST00000486595 910 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SKP288-201ENST00000516227 268 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 RNU6-941P-201ENST00000516346 108 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC007991.1-201ENST00000522680 631 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC022790.1-201ENST00000522872 204 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AP000620.1-201ENST00000527147 504 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AP003385.6-201ENST00000531603 374 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC091516.1-201ENST00000549191 703 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC002310.3-201ENST00000569728 723 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL021879.1-201ENST00000611756 288 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 uc_338.31-201ENST00000615595 186 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL138825.1-201ENST00000618587 192 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC073488.6-201ENST00000632293 754 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 MIR4275-201ENST00000636486 87 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 SAGE2P-201ENST00000420011 2126 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 Z95114.1-201ENST00000624264 14574 ntBASIC5.78□□□□□ -1.48
PCDHGA11Q9Y5H2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms