Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC053481.4-201ENST00000583164 216 ntBASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 AC022509.4-201ENST00000621404 572 ntBASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 AL354798.1-201ENST00000622505 329 ntBASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 AC068724.3-201ENST00000625906 87 ntBASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 AC119674.1-207ENST00000641355 633 ntBASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 AL645937.1-201ENST00000641739 1652 ntBASIC2.73□□□□□ -1.97
RCL1Q9Y2P8 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 SNORD9-201ENST00000362566 104 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RNU5D-1-201ENST00000363299 116 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RNA5SP197-201ENST00000363357 119 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC012498.1-201ENST00000424037 437 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RPL7P46-201ENST00000425129 740 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RPL7P2-201ENST00000427639 268 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 MTCYBP15-201ENST00000433123 1127 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 OR4C10P-201ENST00000434991 931 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC009969.1-201ENST00000438726 172 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC000041.1-201ENST00000439655 175 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 TRIM60P18-201ENST00000441518 828 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RPL21P133-201ENST00000443666 476 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 Z99127.3-201ENST00000448158 395 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 BTF3P5-201ENST00000457252 467 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RN7SL75P-201ENST00000461926 281 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RPS17P11-201ENST00000474297 293 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC111000.2-201ENST00000507775 550 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC010625.1-201ENST00000511296 403 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC108043.1-201ENST00000512696 574 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC093853.1-201ENST00000515689 483 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AP003049.1-201ENST00000529418 457 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 UBE2NP1-201ENST00000545592 458 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 MED28P6-201ENST00000558776 231 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC015917.1-201ENST00000579654 510 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 MIR4286-201ENST00000580651 93 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AL020997.2-201ENST00000602607 184 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 RPL23AP92-201ENST00000603609 255 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 SNORD39.4-201ENST00000620099 78 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AP003122.6-201ENST00000623831 495 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AL356274.2-201ENST00000624379 3752 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 MTCO1P23-201ENST00000415223 1526 ntBASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
RCL1Q9Y2P8 AC093831.2-201ENST00000624393 3427 ntBASIC2.71□□□□□ -1.97
RCL1Q9Y2P8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AL513185.3-201ENST00000433335 1300 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AL136520.1-201ENST00000600311 1322 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 MIR372-201ENST00000362225 67 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RNU6-1066P-201ENST00000363573 105 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RNA5SP283-201ENST00000365604 119 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RNU6-207P-201ENST00000384137 107 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 SNORA1.3-201ENST00000384676 136 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 MIR217-201ENST00000384817 110 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AC016769.3-201ENST00000396562 315 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RPL32P23-201ENST00000397237 405 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RPS4XP3-201ENST00000398541 413 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AL136372.1-201ENST00000403060 228 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 MIR1193-201ENST00000408109 78 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RNU2-15P-201ENST00000410692 191 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RNA5SP38-201ENST00000410750 119 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 SSXP9-201ENST00000417503 292 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 BOLA3P4-201ENST00000418151 400 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AC092634.6-201ENST00000418558 192 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 KRR1P1-201ENST00000419430 803 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 Z93242.1-201ENST00000427102 353 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 OR2AS1P-201ENST00000427827 319 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 MTCYBP32-201ENST00000427945 1084 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AC104472.2-201ENST00000469035 601 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RPL30P14-201ENST00000482744 348 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AC112198.1-201ENST00000505369 1220 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AC010460.1-201ENST00000507087 466 ntBASIC2.71□□□□□ -1.98
RCL1Q9Y2P8 AC008628.1-201ENST00000508663 265 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms