Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RPL21P90-201ENST00000415692 466 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 SPATA20P1-201ENST00000423089 438 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 GAPDHP27-201ENST00000447427 1020 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AKR1D1P1-201ENST00000457236 936 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AC010326.1-201ENST00000462726 602 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 RNU6-677P-201ENST00000516914 101 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 MIR6070-201ENST00000613967 103 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AC011476.5-201ENST00000615594 130 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 AL591926.4-201ENST00000616895 298 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 CR392039.4-201ENST00000624968 501 ntBASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
VPS9D1Q9Y2B5 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC083843.3-201ENST00000623679 2186 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC010894.1-201ENST00000313760 361 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 PPIAP24-201ENST00000328558 471 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 UBE2WP1-201ENST00000362030 340 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 RNA5SP140-201ENST00000364524 92 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 Y_RNA.331-201ENST00000365267 102 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 RNU6-1289P-201ENST00000384431 106 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 RNY4P18-201ENST00000391107 89 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC069218.2-201ENST00000411665 344 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC079809.1-201ENST00000415468 276 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 RPS23P10-201ENST00000416185 486 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 SNX18P26-201ENST00000458433 740 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 SNORD2.1-201ENST00000458762 69 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 RPL30P11-201ENST00000495304 339 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC005519.1-201ENST00000554490 601 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 MIR548X2-201ENST00000579776 100 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 PRPF19P1-201ENST00000584766 898 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AL445487.1-201ENST00000415694 1580 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AC008568.2-201ENST00000623862 2313 ntBASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.47□□□□□ -1.37
VPS9D1Q9Y2B5 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
VPS9D1Q9Y2B5 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VPS9D1Q9Y2B5 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VPS9D1Q9Y2B5 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
VPS9D1Q9Y2B5 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
VPS9D1Q9Y2B5 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VPS9D1Q9Y2B5 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
VPS9D1Q9Y2B5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 RPL9P7-201ENST00000330965 580 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 RNU6-818P-201ENST00000364837 108 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 Y_RNA.309-201ENST00000365046 111 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 Y_RNA.357-201ENST00000365487 109 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 AC019155.1-201ENST00000382242 574 ntBASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
VPS9D1Q9Y2B5 MTND4LP9-201ENST00000427694 174 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms