Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 XKRYP4-201ENST00000414395 483 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AIMP1P1-201ENST00000418670 937 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC114814.2-201ENST00000419195 485 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 ATP5F1P1-201ENST00000433775 569 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 RPS4XP4-201ENST00000443195 763 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 XKRYP5-201ENST00000449659 483 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC091544.1-201ENST00000484702 348 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC105252.1-201ENST00000503089 286 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC017037.2-201ENST00000513850 890 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AF235103.2-201ENST00000525753 346 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC069304.2-201ENST00000605154 435 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC093788.1-201ENST00000609356 927 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 ZFRP1-201ENST00000457579 2970 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 CASC19-284ENST00000642142 1868 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 NXPH1-205ENST00000602349 1953 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.58-201ENST00000362807 102 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.154-201ENST00000363624 102 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 RNY3P1-201ENST00000365085 102 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 RNY3-201ENST00000365484 102 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.490-201ENST00000384413 102 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 RNU6-628P-201ENST00000410675 107 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 RNU2-42P-201ENST00000410697 113 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AL356968.2-201ENST00000412769 1257 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC009310.1-201ENST00000414414 451 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC018644.1-201ENST00000429934 551 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 HMGB1P16-201ENST00000447155 540 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 RAB28P3-201ENST00000448325 597 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 MTCO3P11-201ENST00000455103 774 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AP002453.2-201ENST00000533503 320 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC113403.1-201ENST00000604910 193 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC027807.2-201ENST00000616099 408 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC116563.2-201ENST00000624751 535 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC134503.1-201ENST00000633048 54 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC007529.1-201ENST00000418574 2178 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC068254.2-201ENST00000623938 3577 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 GSTA12P-201ENST00000402398 508 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AL122016.1-201ENST00000403365 367 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AL603766.1-201ENST00000407763 664 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 RN7SKP156-201ENST00000410308 342 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 RNA5SP80-201ENST00000410475 111 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 PTP4A1P1-201ENST00000420539 515 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 MTCO3P21-201ENST00000430791 643 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 SUMO1P1-201ENST00000497904 306 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AL121821.2-201ENST00000556081 394 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC006504.6-201ENST00000590142 199 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC006006.1-201ENST00000603082 144 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC019193.3-201ENST00000609144 554 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC103710.1-201ENST00000610003 901 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC024940.5-201ENST00000622889 474 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 MIR1321-201ENST00000637766 79 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AC007823.1-201ENST00000569932 1566 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms