Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC108751.2-201ENST00000469993 231 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC092470.1-201ENST00000546187 132 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 DYNLL1P4-201ENST00000549314 266 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC079075.1-201ENST00000559543 878 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 MIR1269B-201ENST00000580405 75 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC010525.2-201ENST00000590920 195 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AL512329.2-201ENST00000607350 548 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 SNORD91B-202ENST00000608459 222 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AL049794.2-201ENST00000616301 365 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AL159972.1-201ENST00000625150 448 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 PNPT1P2-201ENST00000456768 2050 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRPF3Q9ULD4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRPF3Q9ULD4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
BRPF3Q9ULD4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC108751.5-201ENST00000492880 1336 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RNU1-130P-201ENST00000363930 160 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RNU6-74P-201ENST00000384235 107 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AL162578.1-201ENST00000406202 378 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 MIR1286-201ENST00000408112 78 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RN7SKP229-201ENST00000410465 302 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC004987.3-201ENST00000413879 771 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RPL35AP12-201ENST00000425362 338 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AL365400.1-201ENST00000431854 640 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RPS11P7-201ENST00000442125 465 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RPL7AP61-201ENST00000443410 636 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RPS20P21-201ENST00000466859 343 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC009127.1-201ENST00000467090 155 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC072052.1-201ENST00000496556 306 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC083829.1-201ENST00000503756 657 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC012400.1-201ENST00000518452 381 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC105031.1-201ENST00000518550 476 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 KC877982.1-201ENST00000602313 470 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AL050343.2-201ENST00000607338 280 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC005858.4-201ENST00000623191 700 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC006020.1-201ENST00000420179 1854 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 AC009902.3-201ENST00000606235 2172 ntBASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRPF3Q9ULD4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 TIMM9P1-201ENST00000436122 256 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 RPS29P10-201ENST00000439197 166 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AL356010.1-201ENST00000456364 102 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC078785.3-201ENST00000476607 425 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 BX284632.1-201ENST00000478218 541 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC008953.1-201ENST00000497334 318 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 TMEM248P1-201ENST00000510579 951 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC105029.1-201ENST00000520250 669 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC007225.2-201ENST00000562529 256 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 YWHAQP7-201ENST00000603536 658 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 RPSAP73-201ENST00000614820 330 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 uc_338.12-201ENST00000616344 181 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 RIOK3P1-201ENST00000418778 1528 ntBASIC6.07□□□□□ -1.44
BRPF3Q9ULD4 AC025031.4-201ENST00000621248 3271 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms