Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RNU6-1252P-201ENST00000363054 104 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RNU6-511P-201ENST00000363496 107 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RN7SKP162-201ENST00000363605 345 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AL359643.1-201ENST00000404109 423 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RNU2-15P-201ENST00000410692 191 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AF228730.2-201ENST00000438784 848 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 TXNP1-201ENST00000441872 371 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 ELOCP24-201ENST00000456370 334 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 SNORD121B-201ENST00000458838 81 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 snoU13.7-201ENST00000459220 104 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RPS27P27-201ENST00000498779 255 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 TRBVA-201ENST00000498804 316 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC017037.1-201ENST00000508460 471 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 BX510359.5-201ENST00000515651 304 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AP003122.3-201ENST00000526316 255 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC109635.4-202ENST00000531666 412 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AP000857.1-201ENST00000532151 543 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 IMMP1LP2-201ENST00000552954 492 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC011626.1-201ENST00000604710 562 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 Z82243.1-201ENST00000609432 473 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AL590099.1-201ENST00000615276 138 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC123768.4-201ENST00000616244 701 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC011155.2-201ENST00000623202 216 ntBASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SALL4Q9UJQ4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 MTND4P1-201ENST00000457501 1466 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 THAP12P5-201ENST00000405864 2275 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 RPL32P3-201ENST00000359025 275 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 RNU6-1188P-201ENST00000363795 107 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 RNU6-82P-201ENST00000363970 107 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 Y_RNA.452-201ENST00000384202 108 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AC069213.2-201ENST00000420238 366 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 SRSF1P1-201ENST00000424058 520 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 MTCYBP10-201ENST00000424905 650 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AL162395.1-201ENST00000457882 422 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 RN7SL72P-201ENST00000460697 269 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AC004801.2-202ENST00000463559 283 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AL133445.1-201ENST00000467051 452 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 RPL30P11-201ENST00000495304 339 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 RNA5SP454-201ENST00000517231 127 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 NRBF2P4-201ENST00000520874 850 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 OR5D15P-201ENST00000531671 942 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 SDR42E1P1-201ENST00000611327 477 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AL157817.1-201ENST00000614264 790 ntBASIC5.66□□□□□ -1.5
SALL4Q9UJQ4 AC074140.1-201ENST00000621617 208 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms