Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 BX248409.1-201ENST00000455497 255 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 MTND1P36-201ENST00000522384 936 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AC139103.1-201ENST00000534696 1030 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AC024153.1-201ENST00000603103 365 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AP002906.1-201ENST00000603405 233 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AC008759.3-201ENST00000613300 508 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 AC080188.3-201ENST00000624842 748 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 MTCO1P24-201ENST00000515438 1558 ntBASIC3.96□□□□□ -1.78
NPC1L1Q9UHC9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC233263.6-201ENST00000631132 1963 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC241520.1-201ENST00000422654 1099 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 MTCO2P1-201ENST00000424648 477 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AL162389.1-201ENST00000449233 177 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC112492.1-201ENST00000449607 712 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 DNAJC19P8-201ENST00000452887 259 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 MRPL35P4-201ENST00000453682 566 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC008280.2-201ENST00000455473 307 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AP002884.2-201ENST00000471647 395 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 KC877373.1-201ENST00000479066 408 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC118282.1-201ENST00000506408 765 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC008885.2-201ENST00000509506 930 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC119751.1-201ENST00000513357 765 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 RN7SKP272-201ENST00000516988 232 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC124293.1-201ENST00000530034 493 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC105429.2-201ENST00000610567 517 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC010338.1-201ENST00000621823 717 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 AC092326.2-201ENST00000624772 1561 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 MTND5P27-201ENST00000428871 1720 ntBASIC3.95□□□□□ -1.78
NPC1L1Q9UHC9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 AC108206.1-201ENST00000570186 4159 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 SNORA63.3-201ENST00000362682 132 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 PRELID3BP11-201ENST00000414230 479 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 ZNF33CP-201ENST00000432492 2030 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 SETP5-201ENST00000437270 562 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 RPS29P6-201ENST00000438196 145 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 AP000949.1-201ENST00000438328 629 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 AL135938.1-201ENST00000443141 297 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 TRAV37-201ENST00000553906 342 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 ZNF849P-201ENST00000594711 1566 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 AC121761.2-201ENST00000617300 689 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 AC078880.5-201ENST00000617845 421 ntBASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPC1L1Q9UHC9 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 MIR449A-201ENST00000362113 91 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RNA5SP167-201ENST00000365461 116 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RNU6-354P-201ENST00000383862 107 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RNU6-610P-201ENST00000384264 107 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RNA5SP80-201ENST00000410475 111 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC012498.1-201ENST00000424037 437 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 DUTP6-201ENST00000425573 462 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC005002.1-201ENST00000447458 540 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC008481.1-201ENST00000463278 396 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RPL23AP62-201ENST00000463396 453 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RPS4XP6-201ENST00000477670 797 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 HIGD1AP13-201ENST00000509878 289 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC087276.1-201ENST00000529659 480 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms