Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 ZNF705CP-201ENST00000530515 889 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AP004242.1-201ENST00000533701 349 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AL389895.1-201ENST00000554127 252 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC122134.1-202ENST00000569111 1201 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 MIR5004-201ENST00000579078 107 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 ZNF415P1-201ENST00000582279 1166 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC012493.2-201ENST00000595083 291 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AL592148.2-201ENST00000612210 372 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 SNORD39.4-201ENST00000620099 78 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 MIR8057-201ENST00000620957 69 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AC110801.1-201ENST00000623590 212 ntBASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCF1Q9UBD9 AL157700.1-201ENST00000561973 1432 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 RNU1-70P-201ENST00000362618 164 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 RNU6-1066P-201ENST00000363573 105 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 RNVU1-3-201ENST00000364313 161 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 RNU6-298P-201ENST00000390888 96 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL355143.1-201ENST00000407101 841 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AIMP1P1-201ENST00000418670 937 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC012065.2-201ENST00000421295 375 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 RPL23AP82-202ENST00000427528 469 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL512649.1-201ENST00000428997 581 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL158071.1-201ENST00000430315 461 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC006028.1-201ENST00000438379 402 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC092393.1-201ENST00000439625 742 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 RNF2P1-201ENST00000442955 1010 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC004022.1-201ENST00000447766 1066 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 CENPBD1P1-201ENST00000464061 469 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC017015.1-201ENST00000477387 286 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 MTCO1P30-201ENST00000515244 580 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC010376.1-201ENST00000522101 334 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 DEFB130C-202ENST00000530001 230 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AP001317.1-201ENST00000531194 960 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AP003385.6-201ENST00000531603 374 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 LRRC6P1-201ENST00000532188 885 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 HIGD1AP1-201ENST00000550979 275 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 MTCYBP27-201ENST00000555160 670 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC015917.1-201ENST00000579654 510 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL355812.1-201ENST00000603215 216 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC025588.3-201ENST00000604182 274 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL162713.1-201ENST00000604480 262 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL157817.1-201ENST00000614264 790 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL157770.1-201ENST00000623049 439 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC026634.1-201ENST00000634369 198 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 U6.98-201ENST00000637157 84 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 MIR7153-201ENST00000637758 57 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC013437.2-201ENST00000639587 677 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 AC000367.1-201ENST00000452711 1766 ntBASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLCF1Q9UBD9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 AC130650.2-201ENST00000618736 2403 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 Y_RNA.578-201ENST00000390903 88 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 RNU6-837P-201ENST00000391056 108 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 EI24P2-201ENST00000397776 1076 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 MTCO1P56-201ENST00000401674 224 ntBASIC2.93□□□□□ -1.94
CLCF1Q9UBD9 RNU4-47P-201ENST00000410876 114 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms