Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AP004217.1-201ENST00000480579 346 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 RN7SL633P-201ENST00000488974 297 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AC118282.2-201ENST00000508739 374 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AC105914.1-201ENST00000511798 226 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 HMGN1P15-201ENST00000513870 295 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 RN7SKP21-201ENST00000516503 220 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AC092474.3-201ENST00000603022 568 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AC073657.2-201ENST00000605661 303 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AL360181.4-201ENST00000621752 134 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AC244258.1-201ENST00000637553 1071 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CLN6Q9NWW5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CLN6Q9NWW5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CLN6Q9NWW5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 OR1S2-201ENST00000302592 978 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 MIR218-2-201ENST00000385006 110 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 PTGES3P2-201ENST00000407942 482 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 RNA5SP344-201ENST00000411081 104 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 CYCSP19-201ENST00000411715 316 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 OR2B8P-201ENST00000432841 938 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 HSPD1P21-201ENST00000436541 245 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 HSPE1P28-201ENST00000443139 211 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AL050341.1-201ENST00000447743 313 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 ELOCP23-201ENST00000452014 332 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 RPL21P18-201ENST00000469899 480 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC093767.1-201ENST00000504523 156 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC027338.1-201ENST00000514840 825 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 SNORD59.2-201ENST00000516873 68 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 RNU6-711P-201ENST00000517255 106 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 ARL2BPP5-201ENST00000523141 481 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 OR5B10P-201ENST00000532869 642 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC098483.2-201ENST00000603158 454 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC012119.1-201ENST00000603184 222 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AL021368.1-201ENST00000607490 540 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 U3.45-201ENST00000607547 219 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AC024941.1-201ENST00000612250 334 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AL162574.2-201ENST00000614618 657 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 AL121594.5-201ENST00000631724 573 ntBASIC2.83□□□□□ -1.96
CLN6Q9NWW5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CLN6Q9NWW5 Z83843.1-201ENST00000604070 3685 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 MAPK10-322ENST00000641485 4530 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 RNA5SP124-201ENST00000362739 110 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 RNU6-353P-201ENST00000364266 108 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 RNU6-1074P-201ENST00000383995 104 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 U6.112-201ENST00000384129 70 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 HMGN1P24-201ENST00000412282 298 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 RAB9AP3-201ENST00000412737 573 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 DUTP6-201ENST00000425573 462 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC093151.1-201ENST00000427711 313 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC108734.1-201ENST00000439549 399 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC044797.1-201ENST00000445744 679 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 RAB9AP1-201ENST00000449393 573 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC140076.1-201ENST00000449897 361 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 RPL36AP33-201ENST00000450395 310 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 RPL26P28-201ENST00000451325 435 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC091179.1-201ENST00000461606 579 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 HMGB1P25-201ENST00000468402 607 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC068724.1-201ENST00000487100 792 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC006483.1-201ENST00000487308 313 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.82□□□□□ -1.96
CLN6Q9NWW5 MTND4LP31-201ENST00000514859 294 ntBASIC2.82□□□□□ -1.96
CLN6Q9NWW5 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms