Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC093535.2-201ENST00000624769 2326 ntBASIC5.93□□□□□ -1.46
CUEDC1Q9NWM3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.93□□□□□ -1.46
CUEDC1Q9NWM3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CUEDC1Q9NWM3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.93□□□□□ -1.46
CUEDC1Q9NWM3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 Z95327.2-201ENST00000414579 1873 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC005224.3-201ENST00000584683 2140 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RNU6-545P-201ENST00000362681 104 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RNA5SP375-201ENST00000362975 119 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RNU6-97P-201ENST00000363387 104 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RNY1-201ENST00000364228 113 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RNU6-125P-201ENST00000384505 107 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 PCNPP3-201ENST00000393579 471 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RAC1P3-201ENST00000416129 580 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC092651.1-201ENST00000426110 312 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 DNAJC19P7-201ENST00000428811 344 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RPL23AP69-201ENST00000431134 458 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 SETP5-201ENST00000437270 562 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AL138752.1-201ENST00000452964 351 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RN7SL515P-201ENST00000463999 297 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC087385.1-201ENST00000475062 312 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 CEACAMP10-202ENST00000495431 496 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC090958.1-201ENST00000511122 351 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RNA5SP434-201ENST00000516647 121 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AP001922.4-201ENST00000526967 290 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AL049779.2-201ENST00000553847 315 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC012433.1-201ENST00000588916 398 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC067852.4-201ENST00000590314 478 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 RPL23AP92-201ENST00000603609 255 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AL512652.1-201ENST00000619006 500 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC127024.6-201ENST00000621598 424 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AL353662.3-201ENST00000625131 237 ntBASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CUEDC1Q9NWM3 AC022325.1-201ENST00000502748 2199 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 RN7SKP95-201ENST00000362860 303 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 Y_RNA.297-201ENST00000364950 91 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 RNU6-338P-201ENST00000383888 105 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 Y_RNA.526-201ENST00000384572 110 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 RNA5SP156-201ENST00000410250 110 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 RNU6-387P-201ENST00000411331 105 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 MRPS18CP6-201ENST00000423587 223 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC016027.5-201ENST00000427227 210 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC023141.3-201ENST00000436698 278 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 CYCSP24-201ENST00000445119 316 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 snoU13.8-201ENST00000458890 104 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC006967.1-201ENST00000467608 589 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC021382.1-201ENST00000483523 359 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC026801.1-201ENST00000497178 464 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 SNORA40.15-201ENST00000516884 107 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC007991.1-201ENST00000522680 631 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC100784.1-201ENST00000522790 310 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AP002770.2-201ENST00000543613 532 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC091516.1-201ENST00000549191 703 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC012669.1-201ENST00000603209 283 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 HMGB1P50-201ENST00000605814 607 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 AC141002.1-201ENST00000607025 279 ntBASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.91□□□□□ -1.46
CUEDC1Q9NWM3 DUSP12P1-201ENST00000612874 516 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms