Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RNU6-259P-201ENST00000383999 107 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 RNU5A-6P-201ENST00000384136 116 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 RNU6-432P-201ENST00000384196 109 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 RNA5SP372-201ENST00000390836 115 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 RNU6-882P-201ENST00000391025 103 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 RPL23AP32-201ENST00000395315 459 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL109941.1-201ENST00000401925 229 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC127391.1-201ENST00000411737 98 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 COX6B1P1-201ENST00000415962 213 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 RPS15AP12-201ENST00000419498 388 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 OR5BE1P-201ENST00000425977 939 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC104850.1-201ENST00000435940 476 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 ARPC3P1-201ENST00000437218 533 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC112498.1-201ENST00000444401 332 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC073587.1-201ENST00000447093 876 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 NANOGNBP1-201ENST00000448444 480 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC025164.1-201ENST00000496249 478 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC135721.1-201ENST00000497954 479 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC078918.1-201ENST00000498515 228 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 GAPDHP56-201ENST00000506031 988 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC021146.3-201ENST00000511911 260 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC026801.2-201ENST00000515352 425 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC008033.2-201ENST00000542626 177 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC125611.2-201ENST00000551907 647 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL133153.1-201ENST00000557756 303 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC099489.2-201ENST00000574976 260 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC006270.2-201ENST00000578523 652 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 DEFB131E-202ENST00000602581 683 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC080078.2-201ENST00000603766 501 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC245517.5-201ENST00000611529 162 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL133173.2-201ENST00000614270 90 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC013476.2-201ENST00000614456 459 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL450472.3-201ENST00000615578 367 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC090510.2-201ENST00000617465 629 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 MIR6130-201ENST00000619419 109 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL049536.1-201ENST00000625043 744 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 OR5BE1P-202ENST00000641168 1176 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 TLK1P1-201ENST00000456760 2440 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 AC139713.2-214ENST00000642059 1811 ntBASIC3.91□□□□□ -1.78
LIN7CQ9NUP9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.9□□□□□ -1.78
LIN7CQ9NUP9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.9□□□□□ -1.78
LIN7CQ9NUP9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.9□□□□□ -1.78
LIN7CQ9NUP9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LIN7CQ9NUP9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIN7CQ9NUP9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIN7CQ9NUP9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 RN7SKP115-201ENST00000363177 317 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 RNU1-20P-201ENST00000363314 162 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 MIR195-201ENST00000385194 87 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 ARL4AP5-201ENST00000404372 599 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 RPS3AP24-201ENST00000407896 734 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 RNU2-8P-201ENST00000410727 190 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 AC119751.6-201ENST00000416712 186 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 PDSS1P1-201ENST00000422953 1114 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 AC119618.1-201ENST00000434191 222 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 AC093414.1-201ENST00000434712 514 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 AL121871.1-201ENST00000443413 436 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 RPL21P89-201ENST00000444021 467 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 RPS11P1-201ENST00000451072 473 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 RPS24P6-201ENST00000452670 400 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 ZFRP1-201ENST00000457579 2970 ntBASIC3.9□□□□□ -1.79
LIN7CQ9NUP9 RPL23AP2-201ENST00000471227 466 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms