Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CISHQ9NSE2 AC002546.1-201ENST00000588041 2504 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 RNU6-386P-201ENST00000362650 107 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 RNU6-335P-201ENST00000364563 113 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 DYNLT3P1-201ENST00000378574 347 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 MIR196B-201ENST00000384852 84 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 EIF5P1-201ENST00000400019 1231 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CISHQ9NSE2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 COX6CP2-201ENST00000444980 225 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 ST13P20-201ENST00000447996 1065 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 HMGB1P38-201ENST00000490557 577 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 AF279873.1-201ENST00000523393 313 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 AC128657.1-201ENST00000549459 145 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 MTCO3P24-201ENST00000572729 782 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 AF131215.7-201ENST00000602443 707 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 AL133393.1-201ENST00000603277 287 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 AC073348.1-201ENST00000623002 331 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.74□□□□□ -1.97
CISHQ9NSE2 AL049737.1-201ENST00000413920 1403 ntBASIC2.74□□□□□ -1.97
CISHQ9NSE2 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CISHQ9NSE2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CISHQ9NSE2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 AL138880.1-201ENST00000405824 642 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 RNU2-71P-201ENST00000411395 189 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC105402.1-201ENST00000413336 545 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 TOMM22P1-201ENST00000418578 312 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 DPPA2P1-201ENST00000428060 556 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 HSPE1P28-201ENST00000443139 211 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 AL513343.1-201ENST00000451818 792 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 BX276092.4-201ENST00000452056 248 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC091179.1-201ENST00000461606 579 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 RPL7P5-201ENST00000471472 736 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 RN7SL432P-201ENST00000484057 298 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 SRIP1-201ENST00000489235 288 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 RNU1-103P-201ENST00000516502 125 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 CKS1BP7-201ENST00000522230 235 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 OR7K1P-201ENST00000546439 926 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC138473.1-201ENST00000605717 526 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 BX664608.1-201ENST00000610519 487 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 AP003485.2-201ENST00000623636 610 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.73□□□□□ -1.97
CISHQ9NSE2 FAM157B-203ENST00000639350 358 ntBASIC2.73□□□□□ -1.97
CISHQ9NSE2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC022031.1-201ENST00000585985 2593 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC104446.1-201ENST00000613728 1321 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC004925.1-201ENST00000624256 2706 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 RPS15AP40-201ENST00000419621 391 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 PSMA2P3-201ENST00000429685 675 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.72□□□□□ -1.97
CISHQ9NSE2 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.72□□□□□ -1.97
CISHQ9NSE2 AL627224.1-201ENST00000448334 444 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC008280.2-201ENST00000455473 307 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 NECAP1P2-201ENST00000455668 727 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC126182.1-201ENST00000478134 357 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.72□□□□□ -1.97
CISHQ9NSE2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CISHQ9NSE2 IGKV2-36-201ENST00000519999 223 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 MTND2P26-201ENST00000528255 1029 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 AL049870.4-201ENST00000555741 486 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC004832.5-201ENST00000608677 401 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC007998.5-201ENST00000622938 237 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 AC110774.1-201ENST00000623567 2018 ntBASIC2.72□□□□□ -1.97
CISHQ9NSE2 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.71□□□□□ -1.97
CISHQ9NSE2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.71□□□□□ -1.98
CISHQ9NSE2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CISHQ9NSE2 RNU4-31P-201ENST00000384211 141 ntBASIC2.71□□□□□ -1.98
CISHQ9NSE2 SAR1AP2-201ENST00000392696 594 ntBASIC2.71□□□□□ -1.98
CISHQ9NSE2 AC080125.1-201ENST00000414888 684 ntBASIC2.71□□□□□ -1.98
CISHQ9NSE2 NUP35P2-201ENST00000416748 943 ntBASIC2.71□□□□□ -1.98
CISHQ9NSE2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.71□□□□□ -1.98
CISHQ9NSE2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.71□□□□□ -1.98
CISHQ9NSE2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.71□□□□□ -1.98
CISHQ9NSE2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.71□□□□□ -1.98
CISHQ9NSE2 OR51AB1P-201ENST00000429046 620 ntBASIC2.71□□□□□ -1.98
CISHQ9NSE2 AC006483.1-201ENST00000487308 313 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms