Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL356121.2-201ENST00000624715 780 ntBASIC4.48□□□□□ -1.69
VPS45Q9NRW7 AC025048.6-202ENST00000627667 438 ntBASIC4.48□□□□□ -1.69
VPS45Q9NRW7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS45Q9NRW7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS45Q9NRW7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS45Q9NRW7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS45Q9NRW7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VPS45Q9NRW7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VPS45Q9NRW7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
VPS45Q9NRW7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
VPS45Q9NRW7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 OR4G11P-202ENST00000642116 1414 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RNU6-433P-201ENST00000363216 104 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RNU6-501P-201ENST00000364072 100 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RNU1-132P-201ENST00000364300 164 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 SNORA70.4-201ENST00000365509 134 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RNY3P10-201ENST00000384764 102 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RNU6-821P-201ENST00000390995 107 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC016769.3-201ENST00000396562 315 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 SNORA11F-201ENST00000408237 128 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 Y_RNA.599-201ENST00000410489 109 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC083875.1-201ENST00000419509 405 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL035410.1-201ENST00000427409 427 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL512649.1-201ENST00000428997 581 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 LARP1BP3-201ENST00000437229 869 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 UBE2V1P3-201ENST00000439651 417 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 ST13P20-201ENST00000447996 1065 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 SUMO2P2-201ENST00000456482 255 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RNA5SP269-201ENST00000459032 137 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC079804.1-201ENST00000461922 436 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC097493.1-201ENST00000463958 372 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RPL7P22-201ENST00000466005 733 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC079140.3-201ENST00000511111 550 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC026412.2-201ENST00000512270 1075 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RNU1-45P-201ENST00000517191 141 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC104986.1-201ENST00000517978 436 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 IGKV2D-36-201ENST00000518643 226 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 GTF2IP22-201ENST00000554443 182 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 MIR4286-201ENST00000580651 93 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AP001004.1-201ENST00000582468 324 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL139395.1-201ENST00000603662 160 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL160290.3-201ENST00000604869 165 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC239868.4-201ENST00000608318 671 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL138721.1-201ENST00000616756 179 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC009509.4-201ENST00000619202 509 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 MIR8059-201ENST00000620427 81 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AL356596.1-201ENST00000624230 379 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.47□□□□□ -1.69
VPS45Q9NRW7 AC010733.2-201ENST00000589496 5702 ntBASIC4.47□□□□□ -1.69
VPS45Q9NRW7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS45Q9NRW7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
VPS45Q9NRW7 AC097714.1-201ENST00000511272 1647 ntBASIC4.46□□□□□ -1.69
VPS45Q9NRW7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VPS45Q9NRW7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.46□□□□□ -1.69
VPS45Q9NRW7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VPS45Q9NRW7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.46□□□□□ -1.69
VPS45Q9NRW7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.46□□□□□ -1.69
VPS45Q9NRW7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS45Q9NRW7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VPS45Q9NRW7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS45Q9NRW7 SNORD82-201ENST00000365530 70 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS45Q9NRW7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS45Q9NRW7 PTMAP2-201ENST00000397627 327 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS45Q9NRW7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS45Q9NRW7 AC092647.1-201ENST00000420654 287 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 FNDC3CP-201ENST00000420795 1155 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 RPS12P5-201ENST00000423449 371 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 RPS3AP44-201ENST00000425466 790 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 MTCO3P30-201ENST00000426425 670 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 ZYG11AP1-201ENST00000430329 837 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 EZH2P1-201ENST00000431167 291 ntBASIC4.46□□□□□ -1.7
VPS45Q9NRW7 RPEP2-201ENST00000432149 701 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms