Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 RNU1-83P-201ENST00000363426 164 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 SNORA70E-201ENST00000384492 135 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 AL592291.1-201ENST00000403830 352 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 RNU2-15P-201ENST00000410692 191 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 EIF1P1-201ENST00000421436 341 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 MTCYBP5-201ENST00000423752 1135 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 MTND1P9-201ENST00000453775 944 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 HMGB3P16-201ENST00000508037 287 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 NDUFB4P2-201ENST00000509515 391 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 AC034268.2-201ENST00000571784 482 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 MIR1254-2-201ENST00000579553 63 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 YWHAQP7-201ENST00000603536 658 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 AC108747.1-201ENST00000609508 535 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 PISRT1-201ENST00000626175 531 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VTA1Q9NP79 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
VTA1Q9NP79 MTCO1P24-201ENST00000515438 1558 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 NXPH1-205ENST00000602349 1953 ntBASIC4.95□□□□□ -1.62
VTA1Q9NP79 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VTA1Q9NP79 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VTA1Q9NP79 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VTA1Q9NP79 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VTA1Q9NP79 Y_RNA.41-201ENST00000362646 102 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 RNU6-853P-201ENST00000364306 107 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 RNU1-64P-201ENST00000365443 163 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VTA1Q9NP79 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VTA1Q9NP79 FCF1P10-201ENST00000407590 479 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 CYCSP10-201ENST00000417973 294 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 C1DP2-201ENST00000418167 426 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 Z74021.1-201ENST00000423610 407 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 OR51AB1P-201ENST00000429046 620 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 BTF3P10-201ENST00000433415 495 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AL132765.1-201ENST00000434165 553 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC122718.1-201ENST00000439448 744 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 MTCO2P3-201ENST00000442543 421 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AL022238.1-201ENST00000442557 355 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 snoU109.4-201ENST00000458953 143 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 FAM133DP-201ENST00000464802 691 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC146507.1-201ENST00000468335 354 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC091133.4-201ENST00000511142 308 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 RNA5SP49-201ENST00000516450 115 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC006960.3-201ENST00000561845 705 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC106785.1-201ENST00000565935 262 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC013476.2-201ENST00000614456 459 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 AC099654.13-201ENST00000639774 207 ntBASIC4.94□□□□□ -1.62
VTA1Q9NP79 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VTA1Q9NP79 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VTA1Q9NP79 LINC01109-201ENST00000603837 3081 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VTA1Q9NP79 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VTA1Q9NP79 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VTA1Q9NP79 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 RPL7P25-201ENST00000404151 721 ntBASIC4.93□□□□□ -1.62
VTA1Q9NP79 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.93□□□□□ -1.62
VTA1Q9NP79 AL359704.1-201ENST00000411586 781 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms