Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RNU6-805P-201ENST00000365643 106 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AL121978.1-201ENST00000402778 359 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RPL7P44-201ENST00000424827 742 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RN7SL594P-201ENST00000470590 287 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RPL7P23-201ENST00000493874 747 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RN7SL504P-201ENST00000494496 287 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 SNORA31.8-201ENST00000516327 108 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 NDUFB9P3-201ENST00000521269 501 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 COX6CP3-201ENST00000580869 223 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 MIR4276-201ENST00000584832 70 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 ZNF92P2-201ENST00000600543 1059 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 BNIP3P38-201ENST00000601117 544 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AC092474.3-201ENST00000603022 568 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 Z83843.1-201ENST00000604070 3685 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AC006329.2-201ENST00000611491 394 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 MFSD8-233ENST00000641482 4860 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AC008432.1-201ENST00000615912 1320 ntBASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TM9SF3Q9HD45 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 RNU1-75P-201ENST00000347264 129 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 RNA5SP374-201ENST00000362939 125 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AL023807.1-201ENST00000407932 359 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 RPS7P13-201ENST00000413955 498 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AL035410.1-201ENST00000427409 427 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC006028.1-201ENST00000438379 402 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 RNFT1P2-201ENST00000443064 757 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC005002.1-201ENST00000447458 540 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 TRBV26-201ENST00000456572 344 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 RPS20P24-201ENST00000457473 361 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 RPL21P13-201ENST00000488305 481 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC020893.1-201ENST00000502452 580 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC010468.3-201ENST00000508225 458 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AP006245.1-201ENST00000522549 120 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AP001804.3-201ENST00000525146 880 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AP003168.1-201ENST00000530091 307 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC018630.1-201ENST00000541376 925 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AL845331.3-202ENST00000562856 261 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC006557.5-201ENST00000603126 811 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC090897.3-201ENST00000636973 1157 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AL136520.1-201ENST00000600311 1322 ntBASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TM9SF3Q9HD45 AL356274.2-201ENST00000624379 3752 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 AP002088.1-201ENST00000382740 395 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 RNU6-730P-201ENST00000383954 104 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 SKINT1L-201ENST00000401057 817 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 AL024507.1-201ENST00000412741 274 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 OR51A3P-201ENST00000413596 924 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 AC099677.1-201ENST00000420575 175 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 MTATP6P4-201ENST00000427725 675 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 Z75741.1-201ENST00000446793 314 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 HMGB1P25-201ENST00000468402 607 ntBASIC3.38□□□□□ -1.87
TM9SF3Q9HD45 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms