Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.97□□□□□ -1.61
CD248Q9HCU0 AC103710.4-201ENST00000609301 899 ntBASIC4.97□□□□□ -1.61
CD248Q9HCU0 AC083809.1-201ENST00000615051 472 ntBASIC4.97□□□□□ -1.61
CD248Q9HCU0 AC110994.2-201ENST00000635481 492 ntBASIC4.97□□□□□ -1.61
CD248Q9HCU0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CD248Q9HCU0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.97□□□□□ -1.61
CD248Q9HCU0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CD248Q9HCU0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CD248Q9HCU0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CD248Q9HCU0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.96□□□□□ -1.61
CD248Q9HCU0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.96□□□□□ -1.61
CD248Q9HCU0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD248Q9HCU0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD248Q9HCU0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD248Q9HCU0 Y_RNA.58-201ENST00000362807 102 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 Y_RNA.154-201ENST00000363624 102 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 RNY3P1-201ENST00000365085 102 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 RNU6-619P-201ENST00000365146 108 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 RNY3-201ENST00000365484 102 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD248Q9HCU0 SNORA70F-201ENST00000384142 135 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 Y_RNA.490-201ENST00000384413 102 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 TMSB4XP8-201ENST00000402089 135 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AL049693.1-201ENST00000402760 611 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 OR51A3P-201ENST00000413596 924 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 TMSB4XP6-201ENST00000415187 135 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 TMSB4XP1-201ENST00000424567 135 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AL353729.1-201ENST00000425044 720 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AL031736.2-201ENST00000426573 787 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 OR2B7P-201ENST00000429302 934 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 TAAR7P-201ENST00000436141 242 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 TXNP5-201ENST00000441043 315 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC000111.2-201ENST00000448200 210 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 OR1H1P-201ENST00000448731 937 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AL590365.1-201ENST00000450788 243 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC010733.1-201ENST00000451515 401 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 RN7SL354P-201ENST00000469282 294 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 RPL35P6-201ENST00000490024 372 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 RPL39P36-201ENST00000490784 156 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC111193.1-201ENST00000504097 155 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 HMGB1P28-201ENST00000507778 552 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC010486.1-201ENST00000511793 424 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 MTND5P4-201ENST00000514978 288 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 RNA5SP216-201ENST00000516111 123 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 AP002812.4-201ENST00000532139 286 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 HIF1AP1-201ENST00000553642 175 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC107954.1-201ENST00000565906 727 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 RPL12P25-202ENST00000598100 674 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC112187.2-201ENST00000604345 283 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC015813.4-201ENST00000610469 179 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC010205.1-201ENST00000616668 449 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 AC006504.8-201ENST00000621046 635 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD248Q9HCU0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.96□□□□□ -1.62
CD248Q9HCU0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD248Q9HCU0 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD248Q9HCU0 GDI2P1-201ENST00000429312 1336 ntBASIC4.96□□□□□ -1.62
CD248Q9HCU0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD248Q9HCU0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD248Q9HCU0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 RNU1-20P-201ENST00000363314 162 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 SNORD81.2-201ENST00000365153 76 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 Y_RNA.431-201ENST00000384086 102 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 U3.30-201ENST00000391308 210 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 RNA5SP345-201ENST00000410646 108 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 JKAMPP1-201ENST00000413804 919 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 AC069213.2-201ENST00000420238 366 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 SNRPEP10-201ENST00000420249 274 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 AL645608.4-201ENST00000423619 154 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 RPL21P110-201ENST00000433345 446 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.95□□□□□ -1.62
CD248Q9HCU0 RPS26P2-201ENST00000440331 348 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 MTND6P13-201ENST00000443510 523 ntBASIC4.95□□□□□ -1.62
CD248Q9HCU0 ARPC3P5-201ENST00000448802 534 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms