Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 UBTFL10-201ENST00000528532 562 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC011472.4-201ENST00000615848 491 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AL157700.1-201ENST00000561973 1432 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 U8.9-201ENST00000365667 134 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC240504.1-201ENST00000395709 845 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 RSL24D1P4-201ENST00000400938 484 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC080125.1-201ENST00000414888 684 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 USP9YP20-201ENST00000419224 558 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 FCF1P1-201ENST00000432690 571 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 MTCYBP12-201ENST00000440559 1134 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AL513328.1-201ENST00000446460 224 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC103975.1-201ENST00000482506 483 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 OR5H4P-201ENST00000510851 923 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC008413.1-201ENST00000511864 177 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC108120.2-201ENST00000512973 294 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 SEC11B-201ENST00000518383 499 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 MAGOH2P-202ENST00000584384 429 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AP003117.2-201ENST00000606010 545 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 MIR4496-201ENST00000635896 61 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC046144.1-201ENST00000478559 1853 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 RNU6-317P-201ENST00000384031 107 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 MIR320B1-201ENST00000390209 79 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 HNRNPDP2-201ENST00000406475 478 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 RN7SKP223-201ENST00000410582 62 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AL139413.1-201ENST00000421309 217 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 MTATP6P11-201ENST00000428071 670 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 RPL36AP6-201ENST00000435770 321 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 RPL21P103-201ENST00000479921 488 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AP003102.1-201ENST00000525638 661 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 OR4U1P-201ENST00000554958 912 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC008277.2-201ENST00000605196 797 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC009159.1-201ENST00000618386 642 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 RMST_5.1-201ENST00000618704 126 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 MIR153-1-201ENST00000384914 90 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 RPL21P112-201ENST00000434403 463 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 RN7SKP283-201ENST00000517197 270 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 CENPUP2-201ENST00000555897 1186 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 AC084035.1-201ENST00000634543 607 ntBASIC2.29□□□□□ -2.04
KIAA1549Q9HCM3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 AL359715.4-201ENST00000606629 1436 ntBASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 EIF5P1-201ENST00000400019 1231 ntBASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 RPS20P5-201ENST00000434808 360 ntBASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 RPL32P28-201ENST00000443577 397 ntBASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 ANXA2P1-201ENST00000505539 926 ntBASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 MIR3945-201ENST00000581853 98 ntBASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 AC107294.3-201ENST00000609211 526 ntBASIC2.28□□□□□ -2.04
KIAA1549Q9HCM3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms