Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AL451074.6-201ENST00000608512 729 ntBASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 AC073968.1-201ENST00000618594 637 ntBASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 AC120349.2-201ENST00000625002 298 ntBASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 AC116618.1-201ENST00000634617 774 ntBASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 AC090897.3-201ENST00000636973 1157 ntBASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 RLIMP1-201ENST00000339626 1680 ntBASIC3.49□□□□□ -1.85
VIPAS39Q9H9C1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 CDR1-202ENST00000625883 1485 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 SNRPEP3-201ENST00000338402 276 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 FRG1CP-201ENST00000358464 769 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 RNU4-92P-201ENST00000363783 136 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 MIR513B-201ENST00000385136 84 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC012065.2-201ENST00000421295 375 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 MTCO2P17-201ENST00000424336 677 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AL591419.1-201ENST00000427423 339 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 RPL23AP69-201ENST00000431134 458 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AL050321.1-201ENST00000432363 400 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC092427.1-201ENST00000439177 601 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC115115.1-201ENST00000449927 248 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 UQCRHP3-201ENST00000451503 251 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 UBE2CP3-201ENST00000502715 450 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 OR5H5P-201ENST00000503164 928 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 RNU6-352P-201ENST00000516908 107 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC119501.1-201ENST00000603646 475 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AL159169.3-201ENST00000608871 561 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 SNORD39.4-201ENST00000620099 78 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC023510.2-201ENST00000622162 746 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 MIR6500-201ENST00000622700 86 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AC006963.1-201ENST00000624003 1052 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 MIR7641-1-201ENST00000627518 61 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 U6.101-201ENST00000637707 76 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AP001148.1-201ENST00000624124 2359 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AL353743.1-202ENST00000431724 1695 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 ZNF37BP-203ENST00000452306 1352 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 AL353746.1-201ENST00000566293 6881 ntBASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VIPAS39Q9H9C1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RNU6-216P-201ENST00000363282 104 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RNU1-32P-201ENST00000363937 159 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RNU6-761P-201ENST00000384148 107 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RPL7P60-201ENST00000397636 735 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RPL31P1-201ENST00000398116 372 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AL024474.1-201ENST00000404655 591 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 HSPE1P26-201ENST00000405341 275 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RN7SKP58-201ENST00000411010 305 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC007390.1-201ENST00000415722 356 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AL356095.1-201ENST00000417217 199 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RPL18P10-201ENST00000425606 538 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 CR769776.1-201ENST00000441254 787 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RN7SL459P-201ENST00000481078 302 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 NCOR1P1-202ENST00000486162 291 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC005921.1-201ENST00000510589 286 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RAB9BP1-201ENST00000519581 626 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 OR5D17P-201ENST00000531492 978 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC125611.1-201ENST00000549563 229 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 MTND1P24-201ENST00000552175 861 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC120057.2-201ENST00000571520 271 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AL669831.4-202ENST00000590817 238 ntBASIC3.47□□□□□ -1.85
VIPAS39Q9H9C1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms