Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AL133264.1-201ENST00000407157 562 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 BX323014.1-201ENST00000412876 237 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 RPS15AP6-201ENST00000420703 385 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 HIGD1AP11-201ENST00000438361 280 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 RPL21P18-201ENST00000469899 480 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 FABP5P12-201ENST00000515543 389 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 MIR2276-201ENST00000516886 89 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 NCAPGP2-201ENST00000557911 754 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 MTND4LP25-201ENST00000570218 163 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 RN7SL339P-201ENST00000580597 296 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AP001330.4-201ENST00000604350 154 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC084824.5-201ENST00000612009 413 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AL110115.1-201ENST00000614396 364 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AC068831.7-201ENST00000616954 363 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 Z83843.1-201ENST00000604070 3685 ntBASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1EQ9GZS1 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 RNU6-839P-201ENST00000363347 108 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 OR6K3-202ENST00000368146 996 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 RNU6-468P-201ENST00000384003 109 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 DUTP6-201ENST00000425573 462 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 YME1L1P1-201ENST00000429435 297 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 MTCYBP15-201ENST00000433123 1127 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC241584.1-201ENST00000438469 1241 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 MTND2P19-201ENST00000449129 1012 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC008155.2-201ENST00000464337 397 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 RPS17P11-201ENST00000474297 293 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 KLHL2P1-201ENST00000508691 521 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 SNRPGP16-201ENST00000533275 226 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 COX6CP3-201ENST00000580869 223 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC016877.3-201ENST00000606778 504 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 RMST_8.1-201ENST00000610287 165 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AL355810.1-201ENST00000614629 552 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC068880.4-201ENST00000623082 495 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC093875.1-201ENST00000623688 504 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC118273.1-201ENST00000525324 3006 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 SGO1P2-201ENST00000429458 1589 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AL049780.3-201ENST00000624612 1583 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 AC007496.3-201ENST00000624987 3443 ntBASIC3.37□□□□□ -1.87
POLR1EQ9GZS1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 RNU6-251P-201ENST00000363235 104 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AP002088.1-201ENST00000382740 395 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 MIR23B-201ENST00000384832 97 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 RN7SKP285-201ENST00000410137 318 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AL136133.1-201ENST00000413694 376 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC099677.1-201ENST00000420575 175 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 RPF2P1-201ENST00000424137 906 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 RPL31P54-201ENST00000429803 370 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC097713.2-201ENST00000430199 356 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AP000949.1-201ENST00000438328 629 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms